Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03181 ATGTACAAGGAGTGTAGGCATAACAATGCAGCAAAACTCGGTTGTGTTTCCATTAATGGGCGCTTAGAGATTCTCAAATGCATCATTAATGATGTTATGATGTGTGCTGCTTGCGGGTGTCACCAAATATTTCATCGTAGACACATTATTTACAACCCCATAAGCGTACCCCAAATAATATACAACAATACGAATGTAACAAGGTTGTCACTTGTGGGCCAATTGTACAATTCAACCTACCAAGCCAGAGCCACCAAAGAGGAAGTAGAGGACAAGGTTCACACCAGAGCATAA 294 0.4116 MYKECRHNNAAKLGCVSINGRLEILKCIINDVMMCAACGCHQIFHRRHIIYNPISVPQIIYNNTNVTRLSLVGQLYNSTYQARATKEEVEDKVHTRA. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03181 97 Pfam ZF-HD protein dimerisation region 2 48 IPR006456 -
Seca6g03181 97 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 2 48 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03181 Seca-Chr6 98289977 98290270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03181 1 75 ZF-HD Transcription Factor Family AT1G14687 42.667 2.65e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Seca6g03181 ZF-HD_dimer 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03181 - - lja:Lj4g3v2313490.1 59.3066