Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03164 ATGGGTATTGAAAATGGAGAGTTCAGCGTTAGTGTGACCAATGAAGAGGTTGTGGCGGCAGTACTTCCAATGCAAGAGCATTGGCTACCACTCTCTAACCTTGACCTTCTCCTACCTCCAGTCGATGTGGGAGTTTTCTTCTGTTACAAGAACCCCATGATGTCTTCTTCTTCTACCACCTTATTGAGAGATTATGATAATGAATATGGCACCAACACAATATTAATGAATAACTTTGCATCTATGGTGGGGTGTCTTAAGAAGGCCTTAGCTCAGGCTCTAGTTTCCTACTATGCCCTTGCAGGTGAAGTAGTGACAAATTCTATGGGTGAACCTGAGCTACTTTGCAATAATGGTGGGGTTGATTTTGTTGAAGCTGTAGCAGACGTTGAACTTCAGTGCCTCAACTTTTATAATCCAGATGACTCCTTTGAAGGAAAGCTTGTTCCCAAGAAGAAGCGTGGCGTGCTTGCTGTTCAGGCAACTTTATTAAAATGTGGTGGAATAATAGTGGCATGCACATTTGATCATCGCATAGCAGATGCATATTCAACAAACATGTTCCTTGTATCATGGGCCGAGATGGCCCAACCCATCAAGCCCATCAAGCCCACAACCATCACTTACCCACCATGTTTCCGTCGCTCCCTCCTCAGCCCCCGTCGTCCAAGTTCCATCCATCCTTCCATCCATCGCATGTATATCCCAATCTCCAACCTCCCTCCTCCGTCGGCCATCACCGCCACCCCTTTCCTCAGTCGCATATACTATGTCACAGCAGAGGACCTCCACCGCATTCAATCACTTGCCTCCACCACAGACAATGATAGTACTAAGCGCACAAAGCTTGAGTCTTTATCTGCTTTCTTATGGAAAATGGTAGCTCGTGCAGCTTCAAGAGACGTTAGTGGCAAAAGGGTCATTGCCAAAATGGGCATAGTGGTTGATGGAAGGAAAAGACTCAATAATGGTGATAAAGGAAAAGGAGTAATGATGACTTGCTATTTTGGGAATGTGCTTTCCATACCATTTGGTGAGAAACCAGTGGAGGAGTTAGTGGAAAAGCCATTAGGTTGGGTGGCAAATGAGGTTCATGAATTTGTGGCAAGTGCGACAACAGAGGAACACTTCTTAGGTCTCATTGATTGGGTGGAAGTACACCGACCGGTCCCTGGGTTGGCAAGGATTTATTGTAGTGGTGCTAACGAGGGACCCACTTTTGTTGTGTCTTCTGGGCAAAGGTTCCCGAATGAGAAGGTTGATTTTGGGTGGGGGAAGGCTGTGTTTGCGTCTTACCATTTTCCATGGGGTGGTGAAGCAGGATATGTGATGCCAATGCCAAGCCCTTTAGGAAATGGTGATTGGGTTGTATACATGCATCTTTTGAAGGGACAATTGGAAGTCATAGAGTCTGAGGCTGCTCATGTCTTTAGGCCCTTAACTTGGGATTACCTTAATCAATGA 1464 0.4577 MGIENGEFSVSVTNEEVVAAVLPMQEHWLPLSNLDLLLPPVDVGVFFCYKNPMMSSSSTTLLRDYDNEYGTNTILMNNFASMVGCLKKALAQALVSYYALAGEVVTNSMGEPELLCNNGGVDFVEAVADVELQCLNFYNPDDSFEGKLVPKKKRGVLAVQATLLKCGGIIVACTFDHRIADAYSTNMFLVSWAEMAQPIKPIKPTTITYPPCFRRSLLSPRRPSSIHPSIHRMYIPISNLPPPSAITATPFLSRIYYVTAEDLHRIQSLASTTDNDSTKRTKLESLSAFLWKMVARAASRDVSGKRVIAKMGIVVDGRKRLNNGDKGKGVMMTCYFGNVLSIPFGEKPVEELVEKPLGWVANEVHEFVASATTEEHFLGLIDWVEVHRPVPGLARIYCSGANEGPTFVVSSGQRFPNEKVDFGWGKAVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLLKGQLEVIESEAAHVFRPLTWDYLNQ. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03164 487 Gene3D - 238 472 IPR023213 -
Seca6g03164 487 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 448 - -
Seca6g03164 487 Gene3D - 7 236 IPR023213 -
Seca6g03164 487 Pfam Transferase family 9 58 - -
Seca6g03164 487 Pfam Transferase family 83 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03164 Seca-Chr6 98078311 98083926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03164 85 470 Monolignol Biosynthesis Gene Families AT5G48930 26.536 2.76e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03164 - - gmx:100785067 703.36