Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03161 ATGGTAGTGAAGGTATATGGCCCAGCCTATGCTTCCCCTAAACGGGTGCTGGTGTGTCTGATTGAGAAAGAAGTTGAGTTTGAAGCAGTGCCTGTTGATATCTTCAAGGGAGAGCACAAGGATCCTGAAATCGTCAAATTAAATCCTTTTGGAATGCTTCCAGTCATTCAAGATGGTGATTATACTCTCTATGACCCAAAAGTGATTGAAGAGAGTGAGGAAAAGCTTAGGAAGGTGCTGGATATTTATGAGGAGAGGCTGTCCAAGACCAAGTACTTAGCTGGGGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCCCAGGTTTTCATTTTTTGGCGAATCAAACGGGGAGAGTGAGTTTGATAAGAGATAGGAAGCATGTAAGTGCTTGGTGGGATGATATTAGCAACAGGCCATCTTGGAAGAGGGTTCTAGAGCTATACAAATTCCCTGTCTAG 459 0.4379 MVVKVYGPAYASPKRVLVCLIEKEVEFEAVPVDIFKGEHKDPEIVKLNPFGMLPVIQDGDYTLYDPKVIEESEEKLRKVLDIYEERLSKTKYLAGDFFSLADLSHLPGFHFLANQTGRVSLIRDRKHVSAWWDDISNRPSWKRVLELYKFPV. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03161 152 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 65 - -
Seca6g03161 152 SUPERFAMILY GST C-terminal domain-like 64 150 IPR036282 -
Seca6g03161 152 Pfam Glutathione S-transferase, C-terminal domain 67 139 IPR004046 -
Seca6g03161 152 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 87 IPR004045 -
Seca6g03161 152 FunFam Glutathione S-transferase F2 2 90 - -
Seca6g03161 152 Gene3D - 3 63 - -
Seca6g03161 152 Gene3D - 64 149 - -
Seca6g03161 152 FunFam Glutathione S-transferase F2 52 145 - -
Seca6g03161 152 Pfam Glutathione S-transferase, N-terminal domain 14 74 IPR004045 -
Seca6g03161 152 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 37 152 IPR010987 -
Seca6g03161 152 SUPERFAMILY Thioredoxin-like 3 69 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03161 Seca-Chr6 98033843 98034791 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03161 1 69 Glutathione S-transferase Gene Family AT2G30870 47.826 5.30e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03161 K00799 - gmx:100775421 154.451