Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03156 ATGTCGACCTCTTCAAGGGAGAGCACAAGGAACCTGAGTTCCTCAAGCTCCAGCCTTTTGGAATGCTTCCAGTTATTCAAGATGGTGATTATACTCTCTATGGAATCTCGTGCAATAATCAGATACTATGCAGAGAAGTATAAAGACCAAGGAACTGACTTGTTGGGAAAGACAACAGAAGAAAGGGGTCTTGTGGAGCAATGGCTTGAAGTGGAAGCCCAGAACTTTCATCCACTAATCTACAACTTGGTTATTAATGTTCTGTTTGCCCCATTAATGGGTGTTCCCTCAGACACAAAAGTGATTGAAGAATGTGATGAGAAGCTGAAGAAGGTGCTGGATATCTATGAGGAGAGGCTGTCCAAGACCAAGTACCTGGCTGGGGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCCCATTTGGTCACTATTTGGTGAATCAAACAGGGAGAGGGAATTTAGTGAGAGAGAGGAAGCATGTGAGTGCTTGGTGGGATGATATTAGCAATAGGCCATCTTGGAAGAAGGTTCTAGAGCTATACAAATACCATACATTCCAACCACCCCAATAA 573 0.4363 MSTSSRESTRNLSSSSSSLLECFQLFKMVIILSMESRAIIRYYAEKYKDQGTDLLGKTTEERGLVEQWLEVEAQNFHPLIYNLVINVLFAPLMGVPSDTKVIEECDEKLKKVLDIYEERLSKTKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRERKHVSAWWDDISNRPSWKKVLELYKYHTFQPPQ. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03156 190 Pfam Glutathione S-transferase, C-terminal domain 83 172 IPR004046 -
Seca6g03156 190 Gene3D - 56 178 - -
Seca6g03156 190 SFLD Glutathione Transferase (cytosolic) 34 171 IPR040079 -
Seca6g03156 190 SUPERFAMILY GST C-terminal domain-like 48 179 IPR036282 -
Seca6g03156 190 SFLD Main (cytGST) 34 171 - -
Seca6g03156 190 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 58 190 IPR010987 -
Seca6g03156 190 CDD GST_C_Phi 60 178 IPR034347 -
Seca6g03156 190 FunFam Glutathione S-transferase F2 56 178 - -
Seca6g03156 190 PANTHER GLUTATHIONE S-TRANSFERASE RHO 34 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03156 Seca-Chr6 98013417 98014934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03156 34 177 Glutathione S-transferase Gene Family AT2G30870 64.583 4.27e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03156 K00799 - gmx:100499911 278.485