Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03097 ATGGTAACAATTACAGCCTCTTACACTATAATTCCAAATGAATCGACTCCACAAGGTCGTTTATGGTTGTCCGATATAGACCAAGTCATTCGTATGCGCCACACACTCACCATTTACATTTACAAAGCAAAACACAACCCTGATTTCATAGAGAGGTTGAGGAACTCCCTTAGCAAGATTCTAGTGCACTATTATCCCATAGCTGGTCGAGTGTGTTGGACAGAAGGTGGTCGAATAGAAATCGATTGTAATGCAAAAGGAGCATTATTGCTTGAAGCTGAAACCACAAAAACATTGGGTGATTATGGAGACTTTTCACCCTCTGAGTCCACCAAAGAGCTTGTTCCAACAATCGATTACAATCAACCTATGGAGGAGCTTCCTTTATTAGCAGTGCAACTCACAAGATTCCATGGCAATGAAGGCCTTGCAATTGGAGTTGCTTTCTTCCATCCTTTGGCTGATGGACTTGGAGCCATTCAATTCATCAACTCATGGGCAAAGATAGCTCGAGGAGACACACTAGAGCCCCATGAAATGCCCTTTCTTGATCGAACAATACTAAAATTTTCACACACTCCTTTGGCACCACGCTTTGACCACACAGAGTTGAAGCCTCTGCCACTCATTCTAGGAAGATCTGACACTACTGTTGAAAAAAATAAGAAGGTAACCACTGCATTGTTAAGACTCACAGCAGAGCAAGTGGAAAAGCTCAAAAAGAAGGCCAATGAACAGACCCTGGATTTAGGGTCTAGACCATATAGCAAATATGAAGCTATTGGGGCACATATATGGAGATGTGTATCTAAGGCTCGTGAGCTTGATGAGAATCAACCAATTGTTGTTCGGTTCAATGCTGATATTCGCAGTAGAATTGTTCCACCTCTCCCTCAGAATTATTTTGGGAATGCTCTGACACAAACAGCAGCAAGTGGTCATGTTGGAGAAATCACATCAAAACCATTGAGTTATGTTGCACAAAAGATAAGGGAAGCAATAAAAGTGGTGACAAATGAGTACATAAGGTCGCAACTTGATGTTATTAGAGGACATGACCATTTGGATAATGCAAGGGCTTTATTCTTAGGACAAGAAGGCAATAATGCCTCATTTTTTGGCAATCCTAATTTTCATCTTACAAGTTGGATGAGCATGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTCATTACTTTGGCCTAGCATACGTTGCTCCACATGACAGGGCCTTGATTCTTCTTAGCCCAGAAGGGGATGGCTCTGTTATTGTGTGTCTGCACTTTCAGGAAGCACATATTCAACTTTTCAAGGATTTCTTCTACCGGGATATATGA 1341 0.4191 MVTITASYTIIPNESTPQGRLWLSDIDQVIRMRHTLTIYIYKAKHNPDFIERLRNSLSKILVHYYPIAGRVCWTEGGRIEIDCNAKGALLLEAETTKTLGDYGDFSPSESTKELVPTIDYNQPMEELPLLAVQLTRFHGNEGLAIGVAFFHPLADGLGAIQFINSWAKIARGDTLEPHEMPFLDRTILKFSHTPLAPRFDHTELKPLPLILGRSDTTVEKNKKVTTALLRLTAEQVEKLKKKANEQTLDLGSRPYSKYEAIGAHIWRCVSKARELDENQPIVVRFNADIRSRIVPPLPQNYFGNALTQTAASGHVGEITSKPLSYVAQKIREAIKVVTNEYIRSQLDVIRGHDHLDNARALFLGQEGNNASFFGNPNFHLTSWMSMPVYEADFGWGKPHYFGLAYVAPHDRALILLSPEGDGSVIVCLHFQEAHIQLFKDFFYRDI. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03097 446 Gene3D - 212 444 IPR023213 -
Seca6g03097 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 439 - -
Seca6g03097 446 Pfam Transferase family 1 443 - -
Seca6g03097 446 Coils Coil 229 249 - -
Seca6g03097 446 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03097 Seca-Chr6 97112530 97113870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03097 2 443 Monolignol Biosynthesis Gene Families AT5G48930 35.586 1.25e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03097 K13065 - gmx:100778626 638.262