Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03089 ATGATTTTCTCGTTGAGACAACCTGGTATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAGCCACGGTCGTTTTTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAACCTCTGCACCTTGCATCTCTTGGTGTTGGAAATTTTGGGTCGGTGAGGAATTTTGAGTCAGAGAAGAATCCTGGGAGGGATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGACAGATCAGAGATTGAAGCTGCAGCCACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCGTACCCTTGGCTCACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACCAGGATAGCAGAGGCGCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTTGCTGCAACGGTTAGTATGTCTAAAGTTGCAGTATCATTTACCCATATTATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTAGTGTCAAGATTTCTCTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGTAATATCTTTTCAAAGAAGGGGATGAAAGGAAAGTCTGTCAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCACTTCTCACACCCTTCGCAATTGCTGTGGAAGGGCCACAGATGTGGGCTGCTGGATGGCAAACAGCCATCTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCAGCTCAGAGTATATTCTATCATCTATACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACCTTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCACACGCCAGTTCAGCCCGTCAATGCTCTTGGAGCTGCTATTGCTGTCCTTGGGACCTTCTTATATTCACAGGCAAAACAATAG 1197 0.4411 MIFSLRQPGIGITGSGVVLRNRHATPVQPRSFLPSLSREKVQKPLVSVQKPLHLASLGVGNFGSVRNFESEKNPGRDDLVKCGAYEADRSEIEAAATPTEAVNKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQTAISQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03089 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Seca6g03089 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca6g03089 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Seca6g03089 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03089 Seca-Chr6 97012262 97016669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03089 22 398 Antiporters AT1G61800 75.000 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03089 K15283 - gmx:100801832 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04489 6 112386864 112390833 Seca6g03089 6 97012262 97016669 ECH
Seca6g03089 6 97012262 97016669 Seca6g03089 6 97012262 97016669 ECH
Seca8g00381 8 4306951 4312226 Seca6g03089 6 97012262 97016669 PCT