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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca6g03051
ATGCACCGAGAACTAATGAGGCTACCGGATTCTCATCAAATTGACACATCCAAACATTATGCTGCCCAAGATAATGATGATTTCATACAATCAGAATCAGATAGACAGATGCTTCTTATAAAGAAGCAGGATGAGGAGTTGGATGAGCTTAGTTTAAGTGTGCAAAGAATTGGAGGTGTTGGACTTACAATACATGAAGAACTCGTTGCACAGGAAAAGATTATAGATGAGCTGGGTAACGAGATGGACAGTACATCAAACCGTCTAGATTTTGTCCAAAAAAAAGTGGGAATGGTTATGAAGAAGGCTAGTGCGAAGGGCCAGATCATGATGATATTGGGTTTGTTGGCCCTGTTCATTTTCCTCTTTATCTTGGTCTTCCTCACCTAG
390
0.4051
MHRELMRLPDSHQIDTSKHYAAQDNDDFIQSESDRQMLLIKKQDEELDELSLSVQRIGGVGLTIHEELVAQEKIIDELGNEMDSTSNRLDFVQKKVGMVMKKASAKGQIMMILGLLALFIFLFILVFLT.
130
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca6g03051
129
Coils
Coil
75
95
-
-
Seca6g03051
129
Gene3D
-
44
108
-
-
Seca6g03051
129
ProSitePatterns
Syntaxin / epimorphin family signature.
43
82
IPR006012
GO:0005484|GO:0006886|GO:0016020
Seca6g03051
129
Pfam
SNARE domain
74
125
IPR000727
-
Seca6g03051
129
ProSiteProfiles
t-SNARE coiled-coil homology domain profile.
37
99
IPR000727
-
Seca6g03051
129
FunFam
syntaxin-61 isoform X1
40
101
-
-
Seca6g03051
129
PANTHER
GOLGI SNARE BET1-RELATED
16
126
-
-
Seca6g03051
129
CDD
SNARE_Qc
40
96
-
-
Seca6g03051
129
SUPERFAMILY
SNARE fusion complex
35
99
-
-
Seca6g03051
129
SMART
tSNARE_6
32
99
IPR000727
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca6g03051
Seca-Chr6
96571308
96574688
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca6g03051
1
129
SNARE and Associated Proteins
AT1G28490
74.419
4.43e-65
194
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca6g03051
K08500
-
gmx:100793612
189.504
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Seca6g03051
6
96571308
96574688
Seca6g03051
6
96571308
96574688
PCT
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