Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02984 ATGGTGCTACTGCTACTGAATTTGGCTCACGACCATGCACAGGTGGTGCCTATTTCACTCTTTGTGGCTGTTCTCTGCCTCTGCTTGCTCATTGGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAATCCATTGTTGCCATTCTAATTGGATGCATTGCTGGAATGATACTCTTATTTATCACTAAGGGGAAAAGTTCTCACATCCTTACTTTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTAAAGAAGAAACAGTTCTTCCATAACTTCTTAACCATCATGCTATTTGGGGTGATTGGTGTTTTTATTTCATCATTTGTTATTACAGGAGGCAGCTGGTGGCTGTTCCCCAAGTTGAACTTCCTTGGCCTAACTGGGCGAGATTATCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACACTACAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGGTTGATGTTTCAAGACTTGATGCCAGGACATTGCGTGTCATTGGAGATTTCTTGTATCTATTTTCAACAAGCACTGGTCTTGGAGTTATAGCTGGACTTCTCACAGCATATATCTTAAAAGCCTTAAGCTTTGGAAGGTATGTAGTATTCTCTAAAAATTCCCCAAAATTGTATTTTCAGAATTATCTGAAATGGGAATATCAAAGTTCAATGATTGCACTTCATATTATGGAGTTAACATATGCCTGCAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTGTTAATGGCATACCTATCCTACATGTTGTCTGAGCTATTCGAACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATTTATGTCACACTATGCATGGCATAATGTGACCGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCTTCATTGTCATTTATTGCAGAAACCTTCATATTTCTTTATGTGGGCATGGATGCCCTTGACATGGAAAAGTGGAAGATGAACCAATTAAGTTTTGGAAATTTGATTGGAATTTACAGCTGCTTAATCTTATTAATATTGCTTGGGCGGGCTGCATTTGTTTTCCCCCTCTCTGCTTTATCCAATTATATGAATAGGCGAGCTGACCAAGCATCAAGTATCACATTCAAACAGCAGATAATTATTTGGTGGGCTGGGCTAATGAGGGGAGCAGTCTCCATTGCTCTAGCTTTCAAACAGTTCACATTTTCTGGGGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACGCTGGTGTTTGGTTGTTTTACAAAACCACTTATTAGATATCTGCTTCCCCACAATGCAACAAGTATAAATGTCAGCCATGAAGAATCAGGTCCACCTGCTGAGGACTTGAATCTACCTTTGCTATCACTTGAGGAATCAGCAGCAACCAACATCAGCCGGGCAAAGGAAGGTTTGTCCATGTTAATAGAAAGTCCTGTGTACACCATACATTACTATTGGAGGAAGTTTGATGATGCCTACATGAGACCTATATTTGGGGGACCTCATCGAAACCGGTCAGAGTGCTAG 1674 0.399 MVLLLLNLAHDHAQVVPISLFVAVLCLCLLIGHLLEENRWVNESIVAILIGCIAGMILLFITKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISSFVITGGSWWLFPKLNFLGLTGRDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKVDVSRLDARTLRVIGDFLYLFSTSTGLGVIAGLLTAYILKALSFGRYVVFSKNSPKLYFQNYLKWEYQSSMIALHIMELTYACRHSSVREIALMVLMAYLSYMLSELFELSGILTVFFCGIFMSHYAWHNVTEISRITTRHVFASLSFIAETFIFLYVGMDALDMEKWKMNQLSFGNLIGIYSCLILLILLGRAAFVFPLSALSNYMNRRADQASSITFKQQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFSTLVFGCFTKPLIRYLLPHNATSINVSHEESGPPAEDLNLPLLSLEESAATNISRAKEGLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPHRNRSEC. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02984 557 PANTHER SODIUM/HYDROGEN EXCHANGER 11 550 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca6g02984 557 Gene3D - 137 189 - -
Seca6g02984 557 Pfam Sodium/hydrogen exchanger family 22 233 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02984 557 Pfam Sodium/hydrogen exchanger family 276 473 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02984 557 PRINTS Na+/H+ exchanger signature 105 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca6g02984 557 PRINTS Na+/H+ exchanger signature 90 104 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca6g02984 557 PRINTS Na+/H+ exchanger signature 76 87 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca6g02984 557 PRINTS Na+/H+ exchanger signature 145 155 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02984 Seca-Chr6 95836807 95842057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02984 7 557 Antiporters AT5G55470 67.806 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02984 - - gmx:100813332 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02984 6 95836807 95842057 Seca6g02984 6 95836807 95842057 ECH