Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02963 ATGGCTGTGTCTTTCGCTCTTGACCAACTGCTTCCACTATTAAGAGAAGAAGCCAATCTGCTCATAGGCGTTCACCAAGAATTTGAAGAGATTAAAGATGAACTAGAAAGCATCCAAGCCTTCCTTAAGGATGCAGATAGAAGAGCTACAGCTGCTGCTGCTGAAGGCGGTGACCACAACGGCAGTGAAGGAGTGAAAACATGGGTGAAGCAAGTGAGAGAAGCAGCTTTCCGCATAGAAGACATCATTGATGAATATATGATCCATGTGGGACAGCACCGTCGTGATCCCGGATCATGTGCAGCTTCTCTCCATAAGATTACTCACTGCATCAAGACTTTACTCCCTCGTCATCGAATAGCATCTGAGATTCAGGACATTAAGTCTCGTGTCCGTGAAATCAAAGATAGAAGTGACAGATATGACTTCCAAGTCCAAGGCAGCCGAAACGTCGTCGCATGGCAGAACCTTCGAGAGGAGGCTCCTCTTTACATTGAGGATACTGATGTTGTGGGCTTTGAAGGCCCAAAAGCTAAATTGATCGACTGGCTGGTGAAGGGAACAACAGACCGCACTGTCATCTCTGTGGTTGGAATGGGAGGGCAGGGAAAAACCACTCTTGCCAAGAAAGTTTTTGACAACAAGGATGTGGTTAAGCGCTTTGATTGTCATGCATGGATCACAGTGTCTCGTTCCTACACTCCAGAAGGCTTGCTCAAGGACATGTTAAGGGAGTTTTACAAAGAAAAAAACGAGTCTCTTCCTCAGAATATTCTCAACATGGATCGAAAGTCATTGATTGATCAAGTGAGAAACTACTTGCAGCAAAATAGGTACGTTGTTGTGTTTGATGATGTATGGAACCAAAGCTTTTTGGATGGGATTGAACATGCTGTACTTGATAATAAGAATGGAAGTAGGATATTGATCACTACCAGGAACAGGGAGGTTGCGCTGTTATCTAGGAAAAAATCTATTGTGGAAGTGCATGAGATTCAACCTTTGACTGAAACTGAATCTCTAGAACTGTTCTATAAGAATGCATTCCGATCAAACAATGGACATTGTCCACAAGAATTCATTGATATATCTTCTCAAATTGTTAATCAATGCAGTGGTTTACCACTAGCAATTGTGGTCATTGCTCGTCTTTTATCTACCAAAGGAAGGGATACATTTGAATGGGAAAGGTTTAATAGAAATCTAACTTCAGATCTAGAGCAGAATCCCAATTTAGCTGATATAGTGAAGATTTTAGGTTTCAGTTATGATGATTTGCCTTCCCATCTTAAATCATGCTTATTGTATTTTGGAATATATCCTAAAGATTATGAAATTAAATCCAAGAGGCTAATCCGGCAATGGATAGCTGAAGGGTTTGTAAGAAATGATGGAGGGAAAACTTTAGAGGAAATTGCAGAACAATATTTAGCAGAGTTGATCAATAGAAGCCTGGTGCAAGTATCTTCATTTACCATTGATGGCAAAGCTAGAAAATGCCGTGTTCATGACGTATTACGTTGGACAATGATCCTTAGAAAATTTGAGGATTTAAGTTTTTGCCACCATATTAGTGAAGTTGAACGGGTATCCTGGTACAATAGGATCATTCGGCGCCTATCAATATCAACCAATAATTACGATTATTTACTGCAAAGTATTGGAAGCTCGCACACTCGGTCACTGCTTGTTTTTGCAGGTAAAAAATCACCTTTACCTTCAGCCTTTTTGAAGAGGATCCCTGTAAAATTCAAGCTATTGAAGGTTCTTGATTTTGAAGATGGTCAGTTGTATTCTGTTCCTGAAGAATGGAGGAATTTATCCCACTTGAAGTATTTAAACTTAAGGCAAACATGGCTCACACCTGAAATTTTTCTAAAATTCATTGGTAAGCTTCAAAACTTGGAGACCTTGGATACCAGGAATACACTTGTCTGTGAGATGCCAAAGGAGATTAGCAAGCTTAGAAAGCTAAGACATCTTTTGGGTGATTGCATGTCTTTGGTTCAATTGAAGGATGGTATTGGAGGCATGACATCCCTACAGACCCTACGTTATGTGGATGTAGATAACGATGGAGGAGAAGAACTAATTCAAGAGCTTGGAAAGTTGAGACAGTTAAGGGAATTAGGCCTCATTGGAGTTAAGAGAGAGCATGGAGGCACTCTATGTTCCTCAATAAATGAGATGAAAGACTTGGAAAAACTACGTATAGCAGGAGAAGAAATTGACTTGCATTTTATTTCATCCCCTATGCTTCGGGATCTTCATCTGGAAGGGAGGTTAACTAAGTTGCCAGATTGGGTTCCAAAGCTCCAACATCTTGTGAAATTGTTCTTGCGATCCTCCAAGTTAATTGATGATCCATTGAATTTACTACAAAATATGTCAAATTTGTTGCTCCTCAGTCTCTCAATTGATTCATATGAAGGTGAAAGATTGTGTTTTGAAGAGGGGGGGGGGGGGTTCCAAAAGCTAAAGGAACTAAAACTTGAAGAATTGCAGAACTTGAGTTCCATGGTGATTCACAGTGAAGCACTGCATTCTCTAAAAAAGCTCAGGTTATCAAATGTCCCCCAACTCAAGATGGTACCCTCTGGTATCCAATACTTAAGGATAAGGAGTCTTGAAGTTCTAGACATTCATGACATGTCAACTGAGTTTAATGAGAGCATTGCTCCTGATGGAAGAGCAAGGAATCCCATAATCAGTCATGTGCCTCTTGTATATGTAATGCGGAATTCATTTGACAGGTATTGTTTCGGACCTCTAAGAGGGGCCAAGCTTCCAGTGCAACAGAAATTCAGAGTTTTCCATGTGGAATTTCAAAGCAATGGCTGTGTCTTTCTTTTCCGGCTTTGGCACTTCCCTTCTTAA 2877 0.4049 MAVSFALDQLLPLLREEANLLIGVHQEFEEIKDELESIQAFLKDADRRATAAAAEGGDHNGSEGVKTWVKQVREAAFRIEDIIDEYMIHVGQHRRDPGSCAASLHKITHCIKTLLPRHRIASEIQDIKSRVREIKDRSDRYDFQVQGSRNVVAWQNLREEAPLYIEDTDVVGFEGPKAKLIDWLVKGTTDRTVISVVGMGGQGKTTLAKKVFDNKDVVKRFDCHAWITVSRSYTPEGLLKDMLREFYKEKNESLPQNILNMDRKSLIDQVRNYLQQNRYVVVFDDVWNQSFLDGIEHAVLDNKNGSRILITTRNREVALLSRKKSIVEVHEIQPLTETESLELFYKNAFRSNNGHCPQEFIDISSQIVNQCSGLPLAIVVIARLLSTKGRDTFEWERFNRNLTSDLEQNPNLADIVKILGFSYDDLPSHLKSCLLYFGIYPKDYEIKSKRLIRQWIAEGFVRNDGGKTLEEIAEQYLAELINRSLVQVSSFTIDGKARKCRVHDVLRWTMILRKFEDLSFCHHISEVERVSWYNRIIRRLSISTNNYDYLLQSIGSSHTRSLLVFAGKKSPLPSAFLKRIPVKFKLLKVLDFEDGQLYSVPEEWRNLSHLKYLNLRQTWLTPEIFLKFIGKLQNLETLDTRNTLVCEMPKEISKLRKLRHLLGDCMSLVQLKDGIGGMTSLQTLRYVDVDNDGGEELIQELGKLRQLRELGLIGVKREHGGTLCSSINEMKDLEKLRIAGEEIDLHFISSPMLRDLHLEGRLTKLPDWVPKLQHLVKLFLRSSKLIDDPLNLLQNMSNLLLLSLSIDSYEGERLCFEEGGGGFQKLKELKLEELQNLSSMVIHSEALHSLKKLRLSNVPQLKMVPSGIQYLRIRSLEVLDIHDMSTEFNESIAPDGRARNPIISHVPLVYVMRNSFDRYCFGPLRGAKLPVQQKFRVFHVEFQSNGCVFLFRLWHFPS. 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02963 958 Gene3D - 423 512 IPR036388 -
Seca6g02963 958 Pfam Rx N-terminal domain 2 98 IPR041118 -
Seca6g02963 958 FunFam Probable disease resistance protein At1g61300 152 325 - -
Seca6g02963 958 Gene3D - 1 121 - -
Seca6g02963 958 Gene3D Ribonuclease Inhibitor 557 900 IPR032675 -
Seca6g02963 958 Gene3D - 151 330 IPR027417 -
Seca6g02963 958 Coils Coil 28 48 - -
Seca6g02963 958 CDD RX-CC_like 2 136 IPR038005 -
Seca6g02963 958 PRINTS Disease resistance protein signature 273 287 - -
Seca6g02963 958 PRINTS Disease resistance protein signature 371 385 - -
Seca6g02963 958 PRINTS Disease resistance protein signature 193 208 - -
Seca6g02963 958 PRINTS Disease resistance protein signature 845 861 - -
Seca6g02963 958 PANTHER DISEASE RESISTANCE PROTEIN RP 30 850 IPR044974 GO:0006952
Seca6g02963 958 SUPERFAMILY L domain-like 517 892 - -
Seca6g02963 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 437 IPR027417 -
Seca6g02963 958 FunFam Probable disease resistance protein At1g63360 423 512 - -
Seca6g02963 958 Gene3D - 334 422 IPR042197 -
Seca6g02963 958 Pfam NB-ARC domain 176 425 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02963 Seca-Chr6 95479542 95483098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02963 186 390 WRKY Transcription Factor Family AT5G45050 30.622 3.12e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02963 K13457 - gmx:100789363 917.146