Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02953 ATGGAGTTGGATCTCCAGAATATTTCCTCACCTGAAATCTTATCTTTCTTACTCTTTCTGTTCATAGTGTTTAGCATAATTTGGAGATCAAAATCCAACCTTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTGCCTCTTATAGGGAACATGCACCAGCTTGGTGCAATGTCTCATCATGGCCTAGCAAAATTAGCACAGAGATATGGGCCTCTTATGCATATAAAATGCGGTGGTGTTTCCATCATTGTGGTGTCTTCCCCTGAAATAGCCAAAGAAGTAATGAAGACACATGACATCAATTTTGCAAATAGGCCTCATCTTCTTGCTGCAGATATTATAACTTATGGTTCTAAAGGCATGAGCTTTTCCTCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTCCACGTTTGAACTACTAACTCCAATGCGTGTTGAATCATTTCAATCAATCAGAGAACAGGAAGCATCAAATCTTGTCAAAGAGATAGGTTTGAGTGAAGGGTCATCTATCAATCTCAGTAAGATGATCAACTCATTGGTCTATGGCTTAATATCACGAGTAGCCTTAGGGGGCAAATCCGAAGATCAAGAAGCATTCATAACTGTTATGAAGGATGTCATAAAAATAATTGCTAGTTTTTCTATAGCTGACCTGTTTCCTTCCATTGAAGTGCTTCAAGTTTTGACAGGTATAAGGTCCAAAGCTGAGAAGCTCCATCAAGAGATAGATAGGATCCTTGAGAAAATTGTCAATGATCATAGGGAGGTAAGTTCAGAAACAAGGGCAATCAATGAAAAAGCTGGTGAAGACCTAGTTGATGTCTTACTAAGGCTTCAAAAGCAGAACAACCTTGATCATCCTATAACTGACAGCAATATCAAAGCAAACATGTTGGATATCTTCAGTGCTGGAAGCGGTAGTTCAGCCAAAACCTTAGAGTGGGCTATGTCAGAACTAGTCAAAAACCCAAGGGTGATGGAAAGAGCACAAGCTGAGGTAAGAAGGGTCTTTGATGGAAAAGGGCATGTAGATGAAGCTAACCTCCATGAATTGAAATACTTGAAGTCAGTGATCAAAGAAACCTTGCGTCTACATATTCCTGTGCCATTATTGCTACCAAGAGAATGCAGTGAGACATGTGAAATTAATGGATATGAGATACCAGCTAAGAGTAAGGTCATTATTAATGCATGGGCACTTGGGAGAGATCCAAACTATTGGATTGAACCTGACAAGTTTAATCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAGGGTGCAGATTTTGAGTTTATTCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCACTACATTTGCCATTGCTAATGTTGAACTCTTGCTAGCAAATTTGATTTTCCATTTTGATTGGAAGATGCCTAATGGGGATAATCCTGAAGAACTTGACATGACTGAATCATTTGGTTTGTCTGTGAGAAGAAAACATGATTTGTACTTGATTCCTATTATGTATCACTCTTAG 1518 0.3926 MELDLQNISSPEILSFLLFLFIVFSIIWRSKSNLSNSKLPPGPPKLPLIGNMHQLGAMSHHGLAKLAQRYGPLMHIKCGGVSIIVVSSPEIAKEVMKTHDINFANRPHLLAADIITYGSKGMSFSSYGSYWRQMRKISTFELLTPMRVESFQSIREQEASNLVKEIGLSEGSSINLSKMINSLVYGLISRVALGGKSEDQEAFITVMKDVIKIIASFSIADLFPSIEVLQVLTGIRSKAEKLHQEIDRILEKIVNDHREVSSETRAINEKAGEDLVDVLLRLQKQNNLDHPITDSNIKANMLDIFSAGSGSSAKTLEWAMSELVKNPRVMERAQAEVRRVFDGKGHVDEANLHELKYLKSVIKETLRLHIPVPLLLPRECSETCEINGYEIPAKSKVIINAWALGRDPNYWIEPDKFNPERFLDSSVDYKGADFEFIPFGAGRRMCPGTTFAIANVELLLANLIFHFDWKMPNGDNPEELDMTESFGLSVRRKHDLYLIPIMYHS. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02953 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 FunFam Cytochrome P450 71D8 32 500 - -
Seca6g02953 505 Gene3D Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 Coils Coil 232 252 - -
Seca6g02953 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02953 505 CDD CYP71-like 69 496 - -
Seca6g02953 505 PANTHER OS08G0105600 PROTEIN 63 503 - -
Seca6g02953 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02953 Seca-Chr6 95359718 95361935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02953 14 502 Cytochrome P450 AT5G25120 40.161 3.49e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02953 - - gmx:100818000 791.186