Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02948 ATGGGTCTTCAAGTAACTTATCCTTTGGCCCTTTTCTCTATTTTCCTCTTCATCATTGTGACACTAATACTAAGGAGGAATCCCAAGAAAACTAACTCAATTCCAAATATACCCCCAGGGCCATGGAAACTACCTATAGTAGGCAATATACCCCATCTTGTTGGTTCTCCACCACATAGAAAATTAAGAGAATTAGCAAAAGAATATGGACCCTTGATGCATCTTCAACTTGGTGAGGTCTTCTTCATTATTGTTTCCTCAGCAGAGTATGCTAGGGAGATAATGAAAAACCATGATGTTATCTTTGCATCAAGGCCTCGTTCTCTAACATCAGAGATAATGTTTTATAATTCCACAGACATTGCATTTTCACCTTATGGTGATTACTTGAGACAGCTTAGAAAGATTTGCTCTATAGAGCTTTTAAGTACAAAACGTGTTCAATCTCATTGGCCAATCAGAGAGGAAGAGATGGCTAATCTCATCAAACGCATTGCTTCAGAAGAAGGATCAGTCATCAATCTTTCTCAAGCAGTTATATCACTGATGTACTCAATCACTTCAAGGGCTGCCTTTGGCAAGAAATACATGGAGCAAGAAGAGTTCATTTCAGTGGTTAGAGAAGTTTTAAAGCTTGCTGGAGGGTTCTACATTGGGGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCAGGGATGAGGCCTAAGCTTGAGAAGTTACACCAACAAGTAGACAGAATATTGGATAATATCATCAATGACCATAAAGAGGTTAAGTTAAGAACCAAAGAAGGTCTAGTTGAAGAAGGAGAAGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGATAGTAGCAGTGACCTGGATTTTCTATTAACTAAAAGAAATATCAAGGCTATAATCTTTGATATCTTCACTGGTGGAAGTGACACTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGGATCAAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAAAGGTATTCGAAAGGAGAGGAAGAGCTGATGAAGCTTGCATTGATGAGCTCAAATACTTGAAAGCAGTCATCAAAGAGGTCCTTAGACTACATCCTCCTGGTCCTCTTTTAATTCCAAGAGAGTGTGGACAAGCTTGTGAGATTAATGGTTATAACATACCTGTCCAAAGTAGGATCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAAATATTGGATTGAGCCAGAGAGCTTTTATCCTGAGAGGTTTATTGATAGCTCTATTGACTACAGAGGAACTAGTTTTGAGTACATCCCATTTGGTGCTGGAAGGAGAATTTGTCCAGGCATGAACTATGGTATTGCAAGTGTTGAGTTGGTACTTGCTTCATTGTTGTATCACTTTGATTGGAGACTTCCCAAAGGAATGAAAAGTGAGGATTTGGACATGACTGAGCTATTTGGAGCATCAGTTATAAGAAAAGATGACCTGTACTTGATTCCAATGCCATTTTCACCTTTTTTTCTGTCCATGATTGTTGCACTTAACATAAGGAACAATTTCAGAAAAACAGACTCAACTAGAAATGTACCCCCAGGGCCATGGAAGCTACCTGTTATAGGAAATATTCCCCATCTTGTTGGTTCCCAACCACATAGAAAATTAAGAGAATTAGCAAAAAAATATGGACCCTTGATGCATTTGCAACTTGGTGAGGTCTTCTTCATTGTTGTTTCCTCAGCGGAGTATGCTAAGGAGGTTATGAAAACTCATGATGTTATCTTTGCATCTAGGCCTCATCTTCTAGCCACAGACATTGCATCTTATGATTCCACAGATATAGCTTTTTCACCTTATGGTGATTACTGGAGACAGCTTCGGAAGATTTGTACTACAGAGCTTTTAAGCACAAAAAGGGTCAAATCTCTTTGGCCAATCAGAGAGGAAGAGATCAATACTCTTATCAAATGGATTGCTTCAAAAGAAGGATCAGAAGTCAATCTTACTCAAGTAGTTATTTCAATGATGTATACATTCACTTCAAAGGCTGCATTTGGTAAGACATATGCAGAACAAGAAGAGTTCATATCAGTGGTGAAACAACTTATAAAGCTAGCTGGAGGTTTCTACATTGGTGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCTGGGATGAGGCCTAAACTTGAGAAGTTACACCAAAAAGTAGACAGGATACTGGAGAAAATCATCAATGACCATAAAGAGGCAAGGTCAAGAGCTAAAGAAGATTTGGTTGAAGCAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAAGATAGTAGCAGTGATCGGGATTTTCACTTAACTACTAATAATATCAAGGCTATTATCTTTGATGTCTTCAGTGCTGGAAGTGAGACTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATAAAGGATCCAAGAGTGTTGAAAAAAGCACAAACTGAAGTGAGAGAGGTATTTGATAGGAGAGGAAGGATTGATGAAAGTGGCATTGAGGAACTTAAATATTTGAAATCAGTCATCAAAGAATCCCTGAGATTGCACCCTTCTGTTCCTCTTCTACTTCCAAGGGAATGTGGACAAGCATGTGAGATTAATGGCTATCACATACCTGTCAAAAGTAGGGTCATAGTGAATGCTTGGACAATTGGAAGGGATCCAAAATATTGGACTGAAGCAGAGAGGTTTTATCCTGAAAGGTTTATTGATAGTTCTATTGACTACAAAGGAACTAATTTTGAGTATATCCCATTTGGTGCTGGAAGGAGAATTTGTCCAGGCATGAACTATGGTATGGCAAATGTTGAGCATGTTCTTGCATTGTTATTGTATCATTTTGATTGGAGGCTTCCCAATGGAATGAAAAATGAGGACTTTGACTTGACAGAGGAATTTGGAGTTACTGTGACAAGAAAAGGTGACCTATACTTGATTCCTATAGCTTCTCATAATTCTTTGCTTGCAACATAA 3012 0.3861 MGLQVTYPLALFSIFLFIIVTLILRRNPKKTNSIPNIPPGPWKLPIVGNIPHLVGSPPHRKLRELAKEYGPLMHLQLGEVFFIIVSSAEYAREIMKNHDVIFASRPRSLTSEIMFYNSTDIAFSPYGDYLRQLRKICSIELLSTKRVQSHWPIREEEMANLIKRIASEEGSVINLSQAVISLMYSITSRAAFGKKYMEQEEFISVVREVLKLAGGFYIGDLFPSAKWLQNLSGMRPKLEKLHQQVDRILDNIINDHKEVKLRTKEGLVEEGEEDLIDVLLKFEDSSSDLDFLLTKRNIKAIIFDIFTGGSDTAATTINWAMAEMMKDQRVLKKAQAEVRKVFERRGRADEACIDELKYLKAVIKEVLRLHPPGPLLIPRECGQACEINGYNIPVQSRIIVNAWAIGRDPKYWIEPESFYPERFIDSSIDYRGTSFEYIPFGAGRRICPGMNYGIASVELVLASLLYHFDWRLPKGMKSEDLDMTELFGASVIRKDDLYLIPMPFSPFFLSMIVALNIRNNFRKTDSTRNVPPGPWKLPVIGNIPHLVGSQPHRKLRELAKKYGPLMHLQLGEVFFIVVSSAEYAKEVMKTHDVIFASRPHLLATDIASYDSTDIAFSPYGDYWRQLRKICTTELLSTKRVKSLWPIREEEINTLIKWIASKEGSEVNLTQVVISMMYTFTSKAAFGKTYAEQEEFISVVKQLIKLAGGFYIGDLFPSAKWLQNLSGMRPKLEKLHQKVDRILEKIINDHKEARSRAKEDLVEAEEDLIDVLLKFEDSSSDRDFHLTTNNIKAIIFDVFSAGSETAATTINWAMAEMIKDPRVLKKAQTEVREVFDRRGRIDESGIEELKYLKSVIKESLRLHPSVPLLLPRECGQACEINGYHIPVKSRVIVNAWTIGRDPKYWTEAERFYPERFIDSSIDYKGTNFEYIPFGAGRRICPGMNYGMANVEHVLALLLYHFDWRLPNGMKNEDFDLTEEFGVTVTRKGDLYLIPIASHNSLLAT. 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02948 1003 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 932 941 IPR017972 GO:0005506|GO:0016705
Seca6g02948 1003 PANTHER OS08G0105600 PROTEIN 554 996 - -
Seca6g02948 1003 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Seca6g02948 1003 Gene3D Cytochrome P450 523 989 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 SUPERFAMILY Cytochrome P450 531 993 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 CDD CYP71-like 68 497 - -
Seca6g02948 1003 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 Pfam Cytochrome P450 531 986 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 FunFam Cytochrome P450 71D8 30 501 - -
Seca6g02948 1003 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02948 1003 CDD CYP71-like 561 989 - -
Seca6g02948 1003 FunFam Cytochrome P450 71D8 523 993 - -
Seca6g02948 1003 Coils Coil 746 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02948 Seca-Chr6 95288715 95295623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02948 496 993 Cytochrome P450 AT3G26300 41.304 1.56e-131 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02948 - - fve:101299609 1184.86