Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02947 ATGGCTCTTCAAGCAACGTATCCTCTGGCCCTTTTCTCTATTTTCCTCTTCATCATTGTGACACTAATACTAAGGAGGAATCCCAAGAAAACTAACTCAATTCCAAATATACCCCCAGGGCCATGGAAACTACCTATAGTAGGCAATATACCCCATCTTGTTGGTTCTCCACCACATAGAAAATTAAGAGAATTAGCAAAAGAATATGGACCCTTGATGCATCTTCAACTTGGTGAGGTCTTCTTCATTATTGTTTCCTCAGCAGAGTATGCTAGGGAGATAATGAAAAACCATGATGTTATCTTTGCATCAAGGCCTCGTTCTCTAACATCAGAGATAATGTTTTATAATTCCACAGACATTGCATTTTCACCTTATGGTGATTACTTGAGACAGCTTAGAAAGATTTGCTCTATAGAGCTTTTAAGTACAAAACGTGTTCAATCTCATTGGCCAATCAGAGAGGAAGAGATGGCTAATCTCATCAAACGCATTGCTTCAGAAGAAGGATCAGTCATCAATCTTTCTCAAGCAGTTATATCACTGATGTACTCAATCACTTCAAGGGCTGCCTTTGGCAAGAAATACATGGAGCAAGAAGAGTTCATTTCAGTGGTTAGAGAAGTTTTAAAGCTTGCTGGAGGGTTCTACATTGGGGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCAGGGATGAGGCCTAAGCTTGAGAAGTTACACCAACAAGTAGACAGAATATTGGATAATATCATCAATGACCATAAAGAGGTTAAGTTAAGAACCAAAGAAGGTCTAGTTGAAGAAGGAGAAGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGATAGTAGCAGTGACCTGGATTTTCTATTAACGAAAAGAAATATCAAGGCTATAATCTTTGATATCTTCACTGGTGGAAGTGACAGTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGGATCAAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAATGATATTCAAAAGTAGAGGAAGGGCTGATGAAGCTTGCATTGATGAGCGCAAATACTTGAAAGCAGTCATCAAAGAGGTTCTTAGACTACACCCTCCTGGTCCTCTTTTAATTCCAAGAGAGTGTGGACAAGCTTGTGAGATTAATGGTTATCACATACCTGTCCAAAGTAGGATCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAAATATTGGATTGAGGCAGAGAGCTTTTATCCTGAGAGGTTTATTGATAGCTCTATTGACTACAGAGGAACTAGTTTTGAGTACATCCCATTTGGTGCTGGAAGGAGAATTTGTCCAGGCATGAACTATGGTATTGCAAGTGTTGAGTTGGTACTTGCTTCATTGTTGTATCACTTTGATTGGAGACTTCCCAAAGGAATGAAAAGTGAGGATTTGGACATGACTGAGCTATTTGGAGCTTCTGTTATAAGAAAAGCCATGGCTCCTCAAATCTATGACTTGTTAGCCATTTTCTTCACCTTTTTCCTGTCCATGATTGTTGCACTTAAGATAAAGAACAATTTCAGAAAAACAGACTCAACTACAAATGTACCCCCAGGGCCATGGAAGCTACCTGTTATAGGAAATATTCCCCATCTTGTTGGTTCTCCACCACATAGAAAATTAAGAGAATTAGCAAAAAAATATGGACCCTTGATGCATTTGCAACTTGGTGAGGTCTTCTTCATTGTTGTTTCCTCAGCAGAGTATGCTAAGGAGGTAATGAAAACTCATGATGTTATATTTGCATCTAGGCCTCATCTTCTAGCCATAGAGATTGCATCTTATGATTCCACAGATATAGCTTTTTCACCTTATGGTGATTACTGGAGACAGCTTCGGAAGATTTGTACTATAGAGCTTTTAAGCACAAAAAGGGTCAAATCTCTTTGGCCAATCAGAGAGGAAGAGATCAATACTCTCATCAAATGGATTGCTTCAAAAGAAGGATCAGAAGTCAATCTTACTCAAGCAGTTATTTCAATGATGTATACATTCACTTCAAAGGCTGCTTTTGGTAAGACATATGCAGAACAAGAAGAGTTCATATCAGAGATGAAAAAACTTACAAAGCTAGCTGGAGGTTTCTACATTGGTGACTTCTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCTGGGATGAGGCCTAAACTTGAGAAGTTACACCAAAAAGTAGACAGGATACTGGAGAAAATCATCAATGACCATAAAGAGGCAAGGTCAAGAGCTAAAGAAGATTTGGTTGAAGCAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAAGATAGTAGCAGTGATCGGGATTTTCACTTAACTACTAATAATATCAAGGCTATTATCTTTGTAAGCATTGTTTCTGTCTTCAAAACCAAACATGCATGA 2433 0.3855 MALQATYPLALFSIFLFIIVTLILRRNPKKTNSIPNIPPGPWKLPIVGNIPHLVGSPPHRKLRELAKEYGPLMHLQLGEVFFIIVSSAEYAREIMKNHDVIFASRPRSLTSEIMFYNSTDIAFSPYGDYLRQLRKICSIELLSTKRVQSHWPIREEEMANLIKRIASEEGSVINLSQAVISLMYSITSRAAFGKKYMEQEEFISVVREVLKLAGGFYIGDLFPSAKWLQNLSGMRPKLEKLHQQVDRILDNIINDHKEVKLRTKEGLVEEGEEDLIDVLLKFEDSSSDLDFLLTKRNIKAIIFDIFTGGSDSAATTINWAMAEMMKDQRVLKKAQAEVRMIFKSRGRADEACIDERKYLKAVIKEVLRLHPPGPLLIPRECGQACEINGYHIPVQSRIIVNAWAIGRDPKYWIEAESFYPERFIDSSIDYRGTSFEYIPFGAGRRICPGMNYGIASVELVLASLLYHFDWRLPKGMKSEDLDMTELFGASVIRKAMAPQIYDLLAIFFTFFLSMIVALKIKNNFRKTDSTTNVPPGPWKLPVIGNIPHLVGSPPHRKLRELAKKYGPLMHLQLGEVFFIVVSSAEYAKEVMKTHDVIFASRPHLLAIEIASYDSTDIAFSPYGDYWRQLRKICTIELLSTKRVKSLWPIREEEINTLIKWIASKEGSEVNLTQAVISMMYTFTSKAAFGKTYAEQEEFISEMKKLTKLAGGFYIGDFFPSAKWLQNLSGMRPKLEKLHQKVDRILEKIINDHKEARSRAKEDLVEAEEDLIDVLLKFEDSSSDRDFHLTTNNIKAIIFVSIVSVFKTKHA. 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02947 810 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Seca6g02947 810 Coils Coil 749 769 - -
Seca6g02947 810 Pfam Cytochrome P450 534 799 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 Pfam Cytochrome P450 38 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 SUPERFAMILY Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PANTHER OS08G0105600 PROTEIN 61 495 - -
Seca6g02947 810 CDD CYP71-like 68 494 - -
Seca6g02947 810 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 FunFam Cytochrome P450 71D8 30 498 - -
Seca6g02947 810 Gene3D Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 Gene3D Cytochrome P450 526 807 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 SUPERFAMILY Cytochrome P450 532 801 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02947 810 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02947 Seca-Chr6 95171377 95180322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02947 499 807 Cytochrome P450 AT3G26300 32.808 8.49e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02947 - - fve:101308399 887.1