Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02946 ATGGCTCTACTATTCCTCTACTTGTCATTCCTTTCCTCCTTTGTCCTCTTAACTCTTATTCTACAAAAAATAGGAAGGAAACTCAAGAAAATTAACTCAACTTATAACCTACCCCAAGGGCCTAGAAAGCTACCTATCATAGGAAATATACACAATCTGCTAGGCTCTCAACCCCATAGAAAATTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAAGTTTCTACTCTGATCATTTCATCACCTGAGTGTGCTAGGGAGGTGATGAAAACCCATGATATTAACTTTGCATCAAGGCCTCAACTCCTAGCTTCAGAAATAATGTCTTATAATTCCACTGGTATAGCTTCTTCTCCTTATGGTAATTATTGGAGACAGCTACGGAAAATTTGCACATTGGAGCTTCTAAGCCTAAAACGTGTCAACTCATACAAGCCAATTAGAGAAGAAGAGTTCTCCAATCTTGTCAAATGGATTATTGCTTCAGAGAGAGGATCACCAATCAACCTCACTCAAGCAGTACTATCATCAATATACACAATTGTTTCAAGGGCTGCTTTTGGCAAGAAATGCAAAGACCAAGAAAAGTTTATATCTGCTTTAAAAGAATCAATAAAGATTGCAGGAGGTTTTGACTTAGGAGATTTGTTTCCTTCCACTAAATGGCTTCAACATGTCACTGGTTTGAAGCCTAAGCTTGAGAGATTGCATAGACAAACTGATCAGATAATGGAAAACATCATCAATGAGCATAAAGAAGCAAAGTTAAAAGCCAAAGATGACCAAAGTGAAGCAGAAGAAGATCTGGTAGATGTTCTCATAAAGTACGAGGATGGTACTAAGCAGGATTTTTTCTTAACTAGAAACAATATCAAGGCCATAATCCTGGATATCTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGGTAAGGAATCCAAGAGTGATGAAGAAAGCACAAACTGAGGTGAGAGAGGTTTTTAATATTAAAGGAAAGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAATCAGTAGTCAAAGAAACCCTGAGGCTACACCCTCCAGTACCTCTTTTGCTTCCAAGAGAATGTGGTCAAGCTTGTGAGATACTTTGTTATGACATACCGGCCAAAAGTAAGGTTATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTATTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATACCACTATTGACTACAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGAGAAATGTGGAGCTGGCACTTGCAATGTTATTGTATCATTTTGATTGGAAGCTTCCCAGTGGAATGAGAAGTGAAGAGTTGGACATGACTGAGGAATTTGGAGTCACAATGAGAAGAAAAGATGATCTATTGTTGCTTCCTTTACTATTCCATTACTTTTCCATGGCTCTACTAATCCTCTACTTGTCAGTTCTTTTCTTCTTTGTCCTCTCAACCCTTATGGTACAAAAAAGAGGAAAGAAACTCAAGAAAACTGACTCAACTTATAACCTTCCCAAAGGGCCTAGAAAGCTACCTATTATAGGAAATATACACAATCTCATAAGCTCTCAACCCCATCATAAATTAAGAGACTTGGCCAGAAGATATGGACCTGTTATGCATCTTCAGCTTGGAGAGGTTTCTACAATTGTCATTTCATCACCAGAGTGTGCTAGGGAGGTGATGAAAACCCCTGATGTTAACTTTGCAACAAGGCCTCAAATCCTTGCTACAGAGATAATGTCTTATAATTCCACAAATATAGCTTTTGCTCCTTATGGTAACTATTGGAGACAGCTAAGTAAAATTTGCACATTAGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAATTAGAGAAGAAGAGTTCTCCAATCTTGTCAAATGGATTGCTTCAGAGGAAGGATCACCAATCAACCTCACTGAAGCAGTAATTTCATCAATATACACAATTGTTTCAAGGGCTTCCTTTGGCAAGAAATGCAAGGACCAAGAAAAATTCATATCAGTGGTAAGAAAAGCACTAAAGGTGGGATCTGGCTTTGACTTAGGAGATTTGTTTCCTTCCAGTACATGGCTTCAAGTTATCACTGGTGTGAGGCCTAAGCTTGAGAGGTTGCATAAACAAGCAGATCAGATAATTGAAAACATCATCAATGAGCATAAAGAGGCAGAGTCAAAAGACACAGATGAAGAAAGTGAAGCAGAAGATTTGGTTGATGTCCTCATAAAATATGAGGATGGTAGCAATCAGGATTTTTCCTTGACTAAAAACAATATCAAGGCCATAATCCTGGATATCTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGGTGAGGGATCCAAGAGTAATGAAGAAAGCACAAACTTAG 2523 0.3884 MALLFLYLSFLSSFVLLTLILQKIGRKLKKINSTYNLPQGPRKLPIIGNIHNLLGSQPHRKLRDLARKYGPLMHLQLGEVSTLIISSPECAREVMKTHDINFASRPQLLASEIMSYNSTGIASSPYGNYWRQLRKICTLELLSLKRVNSYKPIREEEFSNLVKWIIASERGSPINLTQAVLSSIYTIVSRAAFGKKCKDQEKFISALKESIKIAGGFDLGDLFPSTKWLQHVTGLKPKLERLHRQTDQIMENIINEHKEAKLKAKDDQSEAEEDLVDVLIKYEDGTKQDFFLTRNNIKAIILDIFGAGGETSASTIDWAMAEMVRNPRVMKKAQTEVREVFNIKGKVDENCINELKYLKSVVKETLRLHPPVPLLLPRECGQACEILCYDIPAKSKVIVNAWAIARDPNYWTEPERFYPERFIDTTIDYKGSNFEYIPFGAGRRICPGSTFGLRNVELALAMLLYHFDWKLPSGMRSEELDMTEEFGVTMRRKDDLLLLPLLFHYFSMALLILYLSVLFFFVLSTLMVQKRGKKLKKTDSTYNLPKGPRKLPIIGNIHNLISSQPHHKLRDLARRYGPVMHLQLGEVSTIVISSPECAREVMKTPDVNFATRPQILATEIMSYNSTNIAFAPYGNYWRQLSKICTLELLSLKRVNSYQPIREEEFSNLVKWIASEEGSPINLTEAVISSIYTIVSRASFGKKCKDQEKFISVVRKALKVGSGFDLGDLFPSSTWLQVITGVRPKLERLHKQADQIIENIINEHKEAESKDTDEESEAEDLVDVLIKYEDGSNQDFSLTKNNIKAIILDIFGAGGETSASTIDWAMAEMVRDPRVMKKAQT. 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02946 840 CDD CYP71-like 68 495 - -
Seca6g02946 840 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PANTHER OS08G0105600 PROTEIN 61 500 - -
Seca6g02946 840 SUPERFAMILY Cytochrome P450 543 840 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Seca6g02946 840 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 Pfam Cytochrome P450 545 839 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 Coils Coil 250 274 - -
Seca6g02946 840 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 FunFam Os08g0105600 protein 538 840 - -
Seca6g02946 840 Coils Coil 749 776 - -
Seca6g02946 840 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 Gene3D Cytochrome P450 535 840 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02946 840 FunFam Cytochrome P450 71D8 30 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02946 Seca-Chr6 95150025 95159487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02946 513 840 Cytochrome P450 AT3G26310 37.092 8.86e-65 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02946 - - fve:101299609 962.6