Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02925 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATTCGATAATTTAGAAGATGCATGGCAATTTTGGGTGAATTACGAAGGCATAAAAGGCTTTGGAGTTAGAAGACAATATTCAAGCAAGAGTAAGAAAGATGGTTCAGTTACATCTTATTTATATGTTTATTGTAAGGAGGGTGTACGGAAACCGGACTCAAGGGATTATAAAACGATCAATCCAAAACCTGAGACAAGAATGGGTTGTATGGCAAGAATAAAAGTCAAACAATTCAATGAAAAATACAAAGTGATTAATTTTGTTGATGATCATAATCACCCACTGCAACCACCAGAAACAATGCATATGTTAGCTTCTCGACGAAGAATAACTGAACATCTAGCATATGGATTTGAAATGGCAGAAGACGCAGGGATTCAACAGAAAGCCTCATTTGATTTGATGAGTAAATATGTAGGAGGTAGAGAGAATCTAGGGTATACTAGACAAGATGCAAAAAATTATTTGAATTCTAGGAGGCAGCGAGATATGGCTTATGGTGAAGCTGGGTATTTGCTACAATATTTCCAACAACAATTGATAGATAATCCTTCATTCTTCCATGCATACCAAACGGATTTGGAAGAGCAAATAACAAATGTATTTTGGGCTGATGCAGGAATGTTGTTTGACTATCATTGCTTTGGTGATGTCATTTCCTTGGATACCACATATTGTACAAATGGAGATCATCGACCCCTTGCAATTTTCTCGGGATTCAACCATTATAAAGGAGGGGTGATCTTTGGGGCATCTTTACTATATGATGAGACTACTGACTTGTTCAAATGGCTTTTGGAAACATTTTTGCAGGCACACAACCAGAAAAAAACACAAACAATTTTTATTGACCAAGACCAAGCCATGGCAAGAGCACTGAGGGAGGTTATACCAGAGACAAAGCATGGTCTATGCACATGGCACATAATGAAAAATGGAATCAAGCATCTTGGCAATTTAATGAAAGATGGATCACATTTCTTACGTGATTTCAAGAAGTGTATGTATGATTGTGAGAAAGAAACAAATTTTGAAGCCTCATGGAGAGCCTTGTTGATGAAATATAAAGTGGAAGAAAACACTTGGTTGAAATCAACATACCAAATAAAAGAGAAATGA 1155 0.3636 MDTNLTLKVGLEFDNLEDAWQFWVNYEGIKGFGVRRQYSSKSKKDGSVTSYLYVYCKEGVRKPDSRDYKTINPKPETRMGCMARIKVKQFNEKYKVINFVDDHNHPLQPPETMHMLASRRRITEHLAYGFEMAEDAGIQQKASFDLMSKYVGGRENLGYTRQDAKNYLNSRRQRDMAYGEAGYLLQYFQQQLIDNPSFFHAYQTDLEEQITNVFWADAGMLFDYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYKGGVIFGASLLYDETTDLFKWLLETFLQAHNQKKTQTIFIDQDQAMARALREVIPETKHGLCTWHIMKNGIKHLGNLMKDGSHFLRDFKKCMYDCEKETNFEASWRALLMKYKVEENTWLKSTYQIKEK. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02925 384 PANTHER OS01G0519700 PROTEIN 5 384 - -
Seca6g02925 384 Pfam MULE transposase domain 230 324 IPR018289 -
Seca6g02925 384 Coils Coil 382 384 - -
Seca6g02925 384 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02925 Seca-Chr6 94911778 94912932 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g02925 MULE 3.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02925 - - gmx:100795482 636.336