Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02912 ATGTCCAAGGGTGTGGTGCTTACACACAGAAATATAATAGCTAATCTTTGCTCTACACTCTTTGATGTAAGGCCAGAAATGATTGGTCAAGTCACCACACTAGGCTTAATTCCCTTATTTCACATTTATGGCATCATTGGAATATGTTGTTCCACTCTTAGAAGCAAAGGGAAAATTATGGTGATAGGAAGATTTGAGTTGAAATTTGAAAACATTAATGCCTTGATCACACATGAGGTCACATTTGCACCTATTGTGCCCTCAATCATTCTTGGCTTGGTAAAAAATCCAATAGTATATGAAATTGATCTCAGTAGATCCCTCCCAAGGAACACGCCAGGGGAACTCCACGTAAGAAGCCGATGTGTAATGCAAGGTTACTATAAACAGGTGGATGAGACGGCCAAACCATCGACAAGAATGGATGGCTTCATACTGGTGACATAG 447 0.4027 MSKGVVLTHRNIIANLCSTLFDVRPEMIGQVTTLGLIPLFHIYGIIGICCSTLRSKGKIMVIGRFELKFENINALITHEVTFAPIVPSIILGLVKNPIVYEIDLSRSLPRNTPGELHVRSRCVMQGYYKQVDETAKPSTRMDGFILVT. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02912 148 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 105 - -
Seca6g02912 148 SUPERFAMILY Acetyl-CoA synthetase-like 2 137 - -
Seca6g02912 148 Pfam AMP-binding enzyme 2 100 IPR000873 -
Seca6g02912 148 Gene3D - 1 105 - -
Seca6g02912 148 Gene3D - 106 147 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02912 Seca-Chr6 94618850 94619689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02912 103 136 Monolignol Biosynthesis Gene Families AT1G62940 64.706 1.18e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02912 K01904 - vvi:100264367 165.622