Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02870 ATGGACCATGTTGCATCAGCATCACTCTCCCCACAACCTTCCCAAGAAGAATTTTGCCTTGCACTCCGCAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAACCCCGGCGCTGTTCTCAAGGTGGTGGACAATCCTGCCCTCGCTGTTCAGTCTGCAGAGGGAGCAGCACACTCTGCGATTCAATATTTCGAGAACATGAGAAACTTTCTGGAGGCAGTCAAGGACATGCAGCTTCTGACATTTGAAGCATCTGATTTGGAGAAGGGGGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGGTTTTATGAATGGAAATTATCTGGTGGAGTTGGTGTGTGGAGGTATGGGGGAACTGTGAGGATTACTTCCTTCCCTAAGAGGTCTCCCTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCACTGGACGAGTCAGAGTCATCACAGTATGAACAGCTGCTAGAATTTCTTAATCTATCTGAAGAGTTCTTGATTGAAGAAACCAGAACTGCCAATGCTCTGGCTTTCCTTTTTGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGACAGATGGGATTGAAGATCTGCCTCTGAATGCAATGGTGATTGACACCTTACTTGGCAAGGTAGTCAAGGATTTCTCTTCTTTGCTTGTTTCTCAAGGAACTCAGCTTGGACTTTTCCTGAAGAAAATATTGAAAGGTGATATTGGTTGTCTCTCGAAGAGAGAGTTTATAGAAGCTATCTCACTATATCTTAATCAAAAAAGGAGTTTGGCATCAAATGATTTCTCCAAATTCTGCATTTGTGGTGGCAAGCGTGATAGTATTCGACAAAATGTCAATTATTCTGCTAATTATGCTGAAGTCATCAATACTCAACAGAAACAACTTGAGGGAATGAAATACTTTTTTGAAGAGACAAAATTGGAGGTCAAACAAATTCAACTGGAGTGGGAGCAAGAATGGAGTAGGCTAGAACATCATATCAAGAGCCTTGAAGTGGCCTCTTCTTCCTACCACAAAGTTTTGGAGGAGAACCGTCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTACCAGGACAATCAAATGGACGGTCTACAGTAGACTATATTGGAGAAAATGGAGACTTGATGATTGTAAATCCCCTTAAGCAGGGAAAAGAAGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAACCATTGGTCCGGTCTGTGCTAGATGGTTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACAATGAGTGGCCCTGATCTGATGTCTGAAGAGACATGGGGTGTAAACTATAGAGCTTTGCGTGACTTATTTCATATATCAAGGGAAAGGGCAGGTTCCATAAAATATGAAGTCTTTGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATATCCTTTTAAGCAGTGCTTCTATCATAATTCTTTTTTTCATGGATTTTTCAGTCCCTTAACAAGATATACATTAGATATACGAAACAATTCTCAACTGAATGGCCTCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGATTTAATGAGAATTGGTCAGAAGAACCGTGCTGTGGGAGCTACAGCTCTAAACGAGAGAAGCAGTCGTTCTCACAGTGTTTTGACTGTTCATGTTCGAGGCATGGAGTTAGTTTCTAACTCCGTTCTTAGGGGCTGTCTCCATCTTGTGGATTTGGCTGGTAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAATAGATCACTTTCAGCACTTGGGGATGTTATTTCTGCTTTGGCACAGAAAAGTCCACATATCCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCCTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACAATAAGCACACTCAAATTTGCTGAGAGGGTTTCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGGGAAATCCGAGAACTAAAGGAAGAGATATCAAGTCTCAAACTGACATTAGAGAGGAAGGAAACAGAGCTGGAGCAATGGAAGGCTGGGATTGCTCGAAACATCATAGAATCTCAGAAACCAAGAGCTGTTTCACCTTTTCATCTGCCTAAATATGGTGCCAGTGGCAGCATGAAGCCTGAAACTAGTCAACGTCTCATGGATGATAGAACCTTTGAGGCTAGAAGTTGCTCTTCGGGTAAGCAACGAAGGTCAAGGTTTCCCTCAACATTTATGGACAAGGATTCCATTCCCAAAATGTCTCTTCTGACTGAAGAAAAATTAGTGAGCTCAGGGAAGGGAAGATCACCATCACCTCCAGTTAGAAGATCATCATCCACTGATAGAGGGTCAGTCATTAAAAGCAAGGTCAAAACTGACACAGCAGACAACCAACCAATACTAAAGCATCCATTTCCAGCTAGAGTACCTGCTAACAAATCCCTTGTCCCAATGCCAATGGCTGCATCCCTTGACAATAACACAAAGGTGCATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAGCATTTCTGAAACACTCTTAAATCTCCAGAAGGTCAACAACTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTTTGTGTAGTAAGACAAGGTGGTATTAGAAAAAGCAAGGTTGAAAGTAAGACTAAGGCCAAGCATCATCAACTATCACCCTTTAAGATTCAAAAGCCTGATTTGATCCCAACATTTATTTCTGATATGGAATTTGCTGGTGAAATGACTATAGAACCACCTCCAAAGAATGATAACTCAGAGCCTGAAAATGATCTTAGATTTATGGAGTCTGCTGCCCATGGTGCTTTAAATCTGAAAAAGATACGTCAGAATCTTCCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAATGCAAGCAGGAGAGCCTTTATTGGCTAGCAAAGTTGAAAACAAACCTTTCAATGGTTCAGGTAGCAATAACAAAGAGGGTAGTGCTACACCCATGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3297 0.414 MDHVASASLSPQPSQEEFCLALRNGLILCNVLNKVNPGAVLKVVDNPALAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKRSPSSIVGSESADESLDESESSQYEQLLEFLNLSEEFLIEETRTANALAFLFDHFGLRLLQAYLRETDGIEDLPLNAMVIDTLLGKVVKDFSSLLVSQGTQLGLFLKKILKGDIGCLSKREFIEAISLYLNQKRSLASNDFSKFCICGGKRDSIRQNVNYSANYAEVINTQQKQLEGMKYFFEETKLEVKQIQLEWEQEWSRLEHHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGRSTVDYIGENGDLMIVNPLKQGKEARRVFSFNKVFGTSVTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMSEETWGVNYRALRDLFHISRERAGSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRYPFKQCFYHNSFFHGFFSPLTRYTLDIRNNSQLNGLNVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGMELVSNSVLRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISSLKLTLERKETELEQWKAGIARNIIESQKPRAVSPFHLPKYGASGSMKPETSQRLMDDRTFEARSCSSGKQRRSRFPSTFMDKDSIPKMSLLTEEKLVSSGKGRSPSPPVRRSSSTDRGSVIKSKVKTDTADNQPILKHPFPARVPANKSLVPMPMAASLDNNTKVHVNSQEPVKQESISETLLNLQKVNNSRKVHQEHEEEQFKQALCVVRQGGIRKSKVESKTKAKHHQLSPFKIQKPDLIPTFISDMEFAGEMTIEPPPKNDNSEPENDLRFMESAAHGALNLKKIRQNLPRNFQNLESRGIMQAGEPLLASKVENKPFNGSGSNNKEGSATPMPEFRRSRSTPRGKFFGLS. 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02870 1098 MobiDBLite consensus disorder prediction 1063 1077 - -
Seca6g02870 1098 Coils Coil 728 762 - -
Seca6g02870 1098 ProSiteProfiles Kinesin motor domain profile. 369 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 Pfam Calponin homology (CH) domain 12 109 IPR001715 GO:0005515
Seca6g02870 1098 CDD CH_AtKIN14-like 1 105 - -
Seca6g02870 1098 FunFam kinesin-like protein KIN-14F 1 109 - -
Seca6g02870 1098 ProSiteProfiles Calponin homology (CH) domain profile. 1 109 IPR001715 GO:0005515
Seca6g02870 1098 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 912 IPR027640 GO:0003777|GO:0007018
Seca6g02870 1098 MobiDBLite consensus disorder prediction 804 885 - -
Seca6g02870 1098 SUPERFAMILY Calponin-homology domain, CH-domain 11 129 IPR036872 -
Seca6g02870 1098 Pfam Kinesin motor domain 375 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 759 IPR027417 -
Seca6g02870 1098 Gene3D Kinesin motor domain 312 723 IPR036961 -
Seca6g02870 1098 MobiDBLite consensus disorder prediction 849 874 - -
Seca6g02870 1098 FunFam kinesin-like protein KIN-14F 364 762 - -
Seca6g02870 1098 Gene3D - 1 108 IPR036872 -
Seca6g02870 1098 SMART kinesin_4 367 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 MobiDBLite consensus disorder prediction 1059 1098 - -
Seca6g02870 1098 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 PRINTS Kinesin heavy chain signature 444 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g02870 1098 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02870 Seca-Chr6 94009335 94016877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02870 360 721 Calmodulin-binding Proteins AT5G65930 39.782 8.13e-73 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02870 K10406 - gmx:100793458 1826.22