Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02869 ATGAAGTGGATGTTTTATTCACTTGGTTTGCCTAACTGGAATTACTGTGGACTACTTTGTTGGAAGGATTATCATGAACACAATAAGATCATGTCCATTGGACATAAGATACTGCCTTTGCCAATGGATGCTAAGTCAGCTGTAGATTTAATGGAGTCTTCCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGTTATGAGAAAAGAGAGGCTAACACAGAACAACCAACAACATCAGAAACCGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAGCTTCATGACCAGCGAGTTGTACTTGTTAACCAGGCAATGAATACTATCTATTCATACTTATTGGATTCTTTTTATAATAACTTGACTGAGGAGGAACTTACAAGAGTACAGGATTACAACTTTGATCATCCTGGTCAGTACAATTATACTTCTTAG 489 0.3804 MKWMFYSLGLPNWNYCGLLCWKDYHEHNKIMSIGHKILPLPMDAKSAVDLMESSSEVHFSGFHMDGYEKREANTEQPTTSETDMYKQPFVIGVAGGAASGKKTVCDMIIQQLHDQRVVLVNQAMNTIYSYLLDSFYNNLTEEELTRVQDYNFDHPGQYNYTS. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02869 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 159 IPR027417 -
Seca6g02869 162 Gene3D - 84 162 IPR027417 -
Seca6g02869 162 PANTHER URIDINE KINASE 57 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02869 Seca-Chr6 93964472 93967028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02869 42 159 PRT Gene Family AT4G26510 56.667 9.66e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02869 K00876 - gmx:100792258 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02869 6 93964472 93967028 Seca6g02868 6 93959836 93964142 PCT