Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02864 ATGGCAGAAATTGCGGTGAACCTGGTGATTGACAAGCTGATTCCATTACTGAGGTATGAAGTGGCAGTGCTGAAAGAGGTGCACAATCAGGTAGCCGACATCAAGGATCAATTAGGCCTGATACGAGCATACCTGAGGGATGCAGACGTGAAAGCAGATAGAGAAGAAAGGAGTGATGTGGTGAAAGAATGGGTGAAGCAGGTGAGAGAAGTAGCACATCGAATAGAAGATGTGATCGATGAATACCTGCTCCAAGTTGCAGAGCGGAGGCAAAAGCGTGGAATCATTGGTGTGGTGGAAAAGATAGCGCGGTTGTTGAGAAGCATAGAGCCGCGACGTGTGATAACCGCAGAGATTCGTGATATCAACACAGTGATAGCCACACTTGATAAACGGAAAGACGTTTTGGGGTTCAATCCAATTGTGGAGTCAAGCAGTGGTGGAAAGGCTTTTACTACGGTGTCAGGGCATGACCTTCGAAGGGCTGCACTGTTCCTTGATGATGCTAAGCTTGTGGGAATCAACGATTCAAAAAAGAAACTCAAAAGCTTGCTGATGGAGGAAGATTCTAGACGCACCATCATCGCCATTGTTGGAACCGGGGGACTCGGTAAAACAACGATTGCGAAGAAACTATATGAGAAGGAGAAACAAAAACAGTTCGATTGCAGTGCTTGGGTGCCCGTGTCTAGCACGTTCAAGGAGAAGAAAATATTTAGGATGATGTTGCAAAGCTTTTATGACCAAGAGGATGAGGATCATGATGAGACTAAGGCCGTGCTAATTAAGAAAATGAACAAGGCCACTCTGATAAGAAAAGTGAGAGAATATTTGCAAGAAAGGAGATATCTGATTGTGTTTGATGATGTTTGGGCAGAAGACTTTTGGGGTTGTGTGGAATTTTCATTACCAGAAAATAACAAAGGAAGCAAAATACTCATCACAACAAGACACATGGGTGTTGCACAATTTTGCAAGAGTTATGCTCATGTTCACATCCATGAGTTGAAAACTTTGTGTTCAAAGCATGCCATGGAATTATTCCATTCCAAGGCATTTCAGTTTCATCCAGAAGGGTGTCCCATAGAACTAATGAAATTGTCACAAGACATTGTGAACAAGTGTGATGGAGTGCCACTAGCTATTGTGTCCATTGCCAGTCTCCTTTCCACAAAAAACAACAACATTTCTGAATGGCAAAAGGTTCATGATAGTCTTGGCTCAAGACTAGCTAGTGATCCTCATCTTAAAAGCTACCACCAAGTCTTATCAGAAAGTTACCATGATCTTCCTTCCCACCTTAAGCCATGCCTCTTGTACTTTGCCCTTTTCCCTAATGGCTACTCTATCAGGTGTGCAAGACTTCTTCGTCTATGGATAGCAGAGAGATTTGTAAATGTAAATGAGAATGAAAATCGTACCCAAGAGGAAGTTGCTGAAGAATACTTGGATGAATTGATTCGTAGGAGTCTAGTTATAGTGTCCTCTAAGTTTATTGATGGCAGGGCCAGAACCTGTAAGGTGCATGATCTGTTGCATGACTTTATTAAGGGAAAGTGTTTGGAGTTGGACTTTTGCCAAGTGATAAGAAATGAAAAGTTTACCTTCAATGCAACAACTAGACGTTTGTCAATCCAATTGGAACCTAACAAAGAAAAAGATGCTTTACCACTTGAAAGAGTTATTGTAGCAGATCATGGTCGAGTACGGTTCTGTTTTGCTTTTAACTTGGATGAGATGCCAAGGTCTCTAGTGAAATCCTTCTTCTCCAGCTTCAAGCTCTTAGTAGGATTGGATTTTGAAAATGCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTATTGCATCTCAAGTATTTGAACTTACAGAATACCAAAATCAAGTCCCTTCCAAGGTTCATTGGCAAGCTTCAGAACCTAGAGACTCTAGATATAAAATACACTCAAGTGCATGAGTTACCTAGTGAGATTAACATGCTCACAAGGCTTCGCCATCTTCTGGCATCTTCCATCAATGAGGTAACAGGATTCCATTCAGCATCTATGCAAGGAGTGGTGGTAAAGAAAGGGATTGGGAATTTAAAGGAGCTGCAAAAGCTATCAAGAGTTGATATGAGTTGTGGGGATAACCTAATCAAGGAAGTGAAAAAATTGAAGCAATTGAGGAGACTTGGACTTGTTAAGCTAAGAGGACATCATGGAAAACAGTTGTGCATTGCAATAGAGGGAATGACACATCTTCAGTCTTTGAACATTGCAGCAGCAGAGGAGCATGAAATTCTTGACCTGCATTCATTGGTTAATCCTCCTCATAACCATCTCCAACGCCTCTATCTACATGCACGTTTAGAAACTCTGCCACGTTGGATTTCAAAGCTCCATGTTCTGGTGAAATTATTCTTGGATTGGTCAAGACTGACAGAAGATCCACTACCATTTCTTAAAGACTTGCCAGAGTTGTTGGAGCTTGAGCTTTATAATGCATTTGAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAAGTTGAAAGATTTACGCTTAGAAAAGATGCAAGCCTTGAAGACCTTAAAAATAGATAAAGGAGCACTGCCTCTTCTTGAAAAGCTGACAATTGGGCCATGCCCTCAAATGGAGGAGGTTCCTCATGATATCCAGAATCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACCCAATGGAAGAGAATGGCTGTGGCATATTGAAGAACATACCATTTGTGTTGTACTCCAAGGGCAACAAGTTCTATACTCTTCACAATGATGCAGGGAATGAAATTGATGACTTTTAG 2829 0.415 MAEIAVNLVIDKLIPLLRYEVAVLKEVHNQVADIKDQLGLIRAYLRDADVKADREERSDVVKEWVKQVREVAHRIEDVIDEYLLQVAERRQKRGIIGVVEKIARLLRSIEPRRVITAEIRDINTVIATLDKRKDVLGFNPIVESSSGGKAFTTVSGHDLRRAALFLDDAKLVGINDSKKKLKSLLMEEDSRRTIIAIVGTGGLGKTTIAKKLYEKEKQKQFDCSAWVPVSSTFKEKKIFRMMLQSFYDQEDEDHDETKAVLIKKMNKATLIRKVREYLQERRYLIVFDDVWAEDFWGCVEFSLPENNKGSKILITTRHMGVAQFCKSYAHVHIHELKTLCSKHAMELFHSKAFQFHPEGCPIELMKLSQDIVNKCDGVPLAIVSIASLLSTKNNNISEWQKVHDSLGSRLASDPHLKSYHQVLSESYHDLPSHLKPCLLYFALFPNGYSIRCARLLRLWIAERFVNVNENENRTQEEVAEEYLDELIRRSLVIVSSKFIDGRARTCKVHDLLHDFIKGKCLELDFCQVIRNEKFTFNATTRRLSIQLEPNKEKDALPLERVIVADHGRVRFCFAFNLDEMPRSLVKSFFSSFKLLVGLDFENAPLDHLPDAVGYLLHLKYLNLQNTKIKSLPRFIGKLQNLETLDIKYTQVHELPSEINMLTRLRHLLASSINEVTGFHSASMQGVVVKKGIGNLKELQKLSRVDMSCGDNLIKEVKKLKQLRRLGLVKLRGHHGKQLCIAIEGMTHLQSLNIAAAEEHEILDLHSLVNPPHNHLQRLYLHARLETLPRWISKLHVLVKLFLDWSRLTEDPLPFLKDLPELLELELYNAFEGVELYIGKGWFKKLKDLRLEKMQALKTLKIDKGALPLLEKLTIGPCPQMEEVPHDIQNLQALQHLRFYEMPMNPMEENGCGILKNIPFVLYSKGNKFYTLHNDAGNEIDDF. 943
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02864 942 SUPERFAMILY L domain-like 507 911 - -
Seca6g02864 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 441 IPR027417 -
Seca6g02864 942 CDD RX-CC_like 2 124 IPR038005 -
Seca6g02864 942 Gene3D - 426 520 IPR036388 -
Seca6g02864 942 Gene3D Ribonuclease Inhibitor 568 928 IPR032675 -
Seca6g02864 942 Gene3D - 151 333 IPR027417 -
Seca6g02864 942 FunFam Probable disease resistance protein At1g61300 157 330 - -
Seca6g02864 942 PANTHER DISEASE RESISTANCE PROTEIN RP 62 859 IPR044974 GO:0006952
Seca6g02864 942 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Seca6g02864 942 Pfam Rx N-terminal domain 5 92 IPR041118 -
Seca6g02864 942 PRINTS Disease resistance protein signature 277 291 - -
Seca6g02864 942 PRINTS Disease resistance protein signature 194 209 - -
Seca6g02864 942 PRINTS Disease resistance protein signature 375 389 - -
Seca6g02864 942 PRINTS Disease resistance protein signature 636 652 - -
Seca6g02864 942 Gene3D - 4 116 - -
Seca6g02864 942 FunFam Probable disease resistance protein At1g63360 427 517 - -
Seca6g02864 942 Gene3D - 339 425 IPR042197 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca6g02864 Seca-Chr6 93924741 93928795 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02864 195 382 WRKY Transcription Factor Family AT5G45050 25.389 5.25e-07 52.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02864 K13457 - qsu:111987192 733.021