Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02863 ATGGCAGAAATTGCGGTGAACCTGGTGATAGGCAAGTTGATTCCATTGCTGAGATATGAAATGACAGTGCTGAAAGAGGTGCACAATCAAGTGGTGGACATCAAGGATCAATTAGGCCTGATACGAGCATACCTGAGGGATGCAGACGTGAAAGCAGATAGAGAAGAAAGGAGTGATGTGGTGAAAGAATGGGTGAAGCAGGTGAGAGAAGTAGCACATCGAATAGAAGATGTGATCGATGAATACCTGCTCCAAGTTGCAGAGCGGAGGCAAAAGCGTGGAATAATTGGTGTGGTAGAGAAGATAGCGCGGTTGTTGAGAAGCATAGAGCCGCGACGTGTGATAACCGCAGAGATTCGTGATATAAACACAGTGATAGCCACACTTGATAAACGGAAAGACGTTTTGGGGTTCAATCCAATTACGGAGTCAAGCAGTGGTGCAAAGACTATTACTACGGTGTCAGGGCATGACCTTCGAAGGGCTGCACTGTTCCTTGATGATGCTAAGCTTGTGGGAATCAACGATTCAAAAAAGAAACTCAAGAGCTTGCTGGTCGAGGAAGATTCTAGACGCACCATCATCGCCGTCGTTGGCACAGGAGGACTCGGTAAAACAACAATTACGAGGAAACTATACGAGAAGCAGAAAGAAAAAAGGTTCGATTGTGGTGCTTGGGTCCCTGTATCTAGCACATTTAAGCAGAAGAAAATATTCAAGTTGATGTTGCAAAGTTTTTATGATCAGGAGGATGACGATGATGACTCTAAGGCTATGTTAATTGAGAAAATGAACAAGGACACTATGATAAGAAAAGTGAGAGAATATTTGCAAGAAAGGAGCTATATAATTGTGTTTGACGATGTTTGGGAAGAAGATTTCTGGGGGCGTGTGGAATTTGCATTACCAGAAAATAACAAAGGAAGCAGGATACTCATCACAACAAGACACAAAGGTGTTGCTCAATTTTGCAAGAGTTATGCACATGTTCATATCCACGAGTTACAACGTTTACGTTCAAGTGATGCCATGGAACTATTCCATCTCAAGGCATTTCAGTTTCAGTCACAAGGTTGTCCCAAAGAGCTAATGAGATTGTCAGAAGACATTGTGAAGAAGTGTGATGGAGTTCCACTTGCAATTGTGGCCATTGCCAGCCTCCTCTCCACAAAAAACAACAACATTTCTGAATGGCAAAAGGTTCATGATAGTCTTGGCTCAAGACTAGCAAGTGACCCTCATCTTAAAAGCTTCAACCAAGTTTTATCAGAAAGTTACCATGATCTTCCTTCCCACCTCAAGCCATGTCTCTTATACTTTGGCCTTTTCCCTGATGACTACTCCATCAGTTGTGCTAGACTTATTCGTTTATGGATAGCAGAGGGATTGGTGAATGTGAAAGAGAATGAAAATCGTACCCCTGAGGAAGTTGCAGAGGAGTACCTGGATGAATTGATTCAAAGAAGTTTGGTTACAGTGTCTACAGAGTCTCTTAATGGCATGCCAAAAAGTTGCAGGGTGCATGATCTGTTACATGACTTTATTAAAGGAAAGTGTTCGGAGGTGGACTTTTGTCAAGTGATAAAAAATGAAAACTTTACCTTCAATGCAACAACTAGACGCTTGTCAATCCAATTGCAACCTAACAAGGAAGATGCTGCTCTTGAAAGAGTTATTGTTGCAGATCATGGTCGAGTGAGGTTTTGTTTTGCTTTTAACTTTGATGAGATGCCAAAGCCTCTATTGAAATCGTTCTTCTCCAGCTTCAAGCTCTTGGTAGGATTGGATTTTGAAGATTCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTGTTGCATCTCAAGTACTTGAACTTAAAGAACACCAAAATTAAGACACTTCCAAAGTTCATTGGTAAGCTTCAGAACCTAGAGACTCTAGATATAAAATACACTCAAGTGCAAGAGTTACCTAGTGAGATTAACAAGCTCACTAAGCTTCGCCATCTTCTGGCATATTCTATCAATGTTGAAATTGAATTCAGCTCAGCATCTATGCAAGGAGTGATGGTAAAGGAAGGGATTGGGCGTTTAAAGGCCTTGCAGAAGCTATCAAGAGTTGATATGACTAATGGAGATAGCCTAATCAAGGAAGTGAAAAATTTGAAGCAATTGAGGAGACTTGGCATTGTCAAACTAAGAAGACATAATGGAAAACCATTATGCAGTGCAATAGAGGGCATGGTGCATCTTCAGTCTTTAAGCATTGCATCAGCAGAGGAGCATGAAATTCTTGACCTGCATTCATTGGTAAATCCTCCTCATCTCCATCTACACCGCCTTTACTTGCATGGGCGTATAGAAACTGTGCCACTCTGGATTCCAAAACTCCATGTTTTGGTGAGGCTATTCTTGAATTGGTCAGGACTAATGGAAGATCCACTGCCATTTCTTAAAGACTTGCCGGAGTTGTTGGAGCTTGAGCTTTATAATGCATTTGAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAAGTTGAAGGAGTTACGACTAGAAAAGATGAAAGCCTTGAAGACCTTAAAAATAGATAGAGGAGCACTGCCTCTTCTTGAAAAGCTGACAATTGGGCCATGCCCTCAAATGGAGGAGATTCCTCATGATATCCAGAATCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACACAACGAAGGAGAAAGGCTATGACATATTGAAGAATATACCATTTGTGATTTATTCCAAGGGCAACAAGTTTTACACTCTTCATAGTGATACAGGGGATGAAACTGATGACTTTTAA 2820 0.4128 MAEIAVNLVIGKLIPLLRYEMTVLKEVHNQVVDIKDQLGLIRAYLRDADVKADREERSDVVKEWVKQVREVAHRIEDVIDEYLLQVAERRQKRGIIGVVEKIARLLRSIEPRRVITAEIRDINTVIATLDKRKDVLGFNPITESSSGAKTITTVSGHDLRRAALFLDDAKLVGINDSKKKLKSLLVEEDSRRTIIAVVGTGGLGKTTITRKLYEKQKEKRFDCGAWVPVSSTFKQKKIFKLMLQSFYDQEDDDDDSKAMLIEKMNKDTMIRKVREYLQERSYIIVFDDVWEEDFWGRVEFALPENNKGSRILITTRHKGVAQFCKSYAHVHIHELQRLRSSDAMELFHLKAFQFQSQGCPKELMRLSEDIVKKCDGVPLAIVAIASLLSTKNNNISEWQKVHDSLGSRLASDPHLKSFNQVLSESYHDLPSHLKPCLLYFGLFPDDYSISCARLIRLWIAEGLVNVKENENRTPEEVAEEYLDELIQRSLVTVSTESLNGMPKSCRVHDLLHDFIKGKCSEVDFCQVIKNENFTFNATTRRLSIQLQPNKEDAALERVIVADHGRVRFCFAFNFDEMPKPLLKSFFSSFKLLVGLDFEDSPLDHLPDAVGYLLHLKYLNLKNTKIKTLPKFIGKLQNLETLDIKYTQVQELPSEINKLTKLRHLLAYSINVEIEFSSASMQGVMVKEGIGRLKALQKLSRVDMTNGDSLIKEVKNLKQLRRLGIVKLRRHNGKPLCSAIEGMVHLQSLSIASAEEHEILDLHSLVNPPHLHLHRLYLHGRIETVPLWIPKLHVLVRLFLNWSGLMEDPLPFLKDLPELLELELYNAFEGVELYIGKGWFKKLKELRLEKMKALKTLKIDRGALPLLEKLTIGPCPQMEEIPHDIQNLQALQHLRFYEMPMNTTKEKGYDILKNIPFVIYSKGNKFYTLHSDTGDETDDF. 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02863 939 Gene3D Ribonuclease Inhibitor 568 918 IPR032675 -
Seca6g02863 939 Gene3D - 425 519 IPR036388 -
Seca6g02863 939 CDD RX-CC_like 2 124 IPR038005 -
Seca6g02863 939 SUPERFAMILY L domain-like 506 909 - -
Seca6g02863 939 Gene3D - 4 116 - -
Seca6g02863 939 FunFam Probable disease resistance protein At1g63360 426 516 - -
Seca6g02863 939 Pfam Rx N-terminal domain 5 92 IPR041118 -
Seca6g02863 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Seca6g02863 939 Gene3D - 149 332 IPR027417 -
Seca6g02863 939 FunFam Probable disease resistance protein At1g61300 157 329 - -
Seca6g02863 939 PRINTS Disease resistance protein signature 276 290 - -
Seca6g02863 939 PRINTS Disease resistance protein signature 194 209 - -
Seca6g02863 939 PRINTS Disease resistance protein signature 374 388 - -
Seca6g02863 939 PRINTS Disease resistance protein signature 633 649 - -
Seca6g02863 939 Gene3D - 337 424 IPR042197 -
Seca6g02863 939 PANTHER DISEASE RESISTANCE PROTEIN RP 62 870 IPR044974 GO:0006952
Seca6g02863 939 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02863 Seca-Chr6 93897769 93902132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02863 195 381 WRKY Transcription Factor Family AT5G45050 23.958 2.42e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02863 K13457 - csin:114256860 739.954