Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02856 ATGGGAGCTAGTCTTTCTACAGGCTTGCCATCTGAGAAATTCTACTCTTTGATCAATTCTGTAGATGCTAAAGTTGCTAATGCAACAATTGAAGATGCTCAACTCTGTAAGATTGGAACTCTTGATCCTAAGAAGGTAAAGGGCAAAATCCTGGTCTGCCTCATAAGGGAGACTAATGGATTAATTTATGCAGAGGCTCAAGCTCTTTCTACAGGCGCAGTAGGACTAATTTTGGCAAATAATAAGCAACGTGGAAATAACATTATGGCATATGCTCATCTATTGCCTACTTCACACATCAACTACACAGATGGTGAACATGTTTATTCCTACATCAAAGATACCAAGACCCCCATGGCTTACATGACAAGAGCCAAAACTCTACTAGGAGTAAAACCAGCTCCTGTAATAGCTTCATTCTCATCTAGGGGACCTAACTCAATCCAACCAATAATCCTCAAGCCTGATATTACTGCACCAGGTGTGGACATTCTTTATGCATTCACAGAAGCCATAAGTCCAACTGGTCTTCCATCAGATAATCGCCGGATTCCATACAATATTGGGTCAGGAACTTCTGCATCTTGCCCTCATGTTTCTGGCATTGTTGGCCTTCTCAAAACACTCTATCCCAATTGGAGTCCTGCAGCCTTGAGATCTGCTATCATGACTACTGCAATGATACTAGATGACAATAACAGACCAATTATGGATCAATATAAGGAAGAAGCAACACCATTTGCTTATGGTGCAGGACACATTCAACCAGAACTTGCAATGGACCCTGGACTTGTGTATGATCTAAATGCTGTTGATTACTTGAACTTCCTATGTGGTCATGGTTACAATCATACACAAATGAGAATGTTTTCTAGGAAGCCCCACACTTGTTCAAAGTATTACAACATGTTAGATTTTAACTATCCTTCAATCACAGTGCCTGATCTTGGGAAACACTCTGTAAAAGTTACTCGTACAGTTACAAATGTTGGGTCACCAGGTACATATCATGTGCATGTGAAGGCACCTGATGGGGTTTCAGTTATGGTTGAGCCAAGATCCTTGACATTTAGTAAAGTTGGTGAGAAGAAGACATTCAAGGTCATTTTGAAGGGCAGCAAAGGTGCATCATCAGGTTATGTGTTTGGTTACTTGTGGTGGTCAGATGGGAGACATAGAGTCAAGAGTCCTCTTGTGGTCAAACATAAATAG 1212 0.4092 MGASLSTGLPSEKFYSLINSVDAKVANATIEDAQLCKIGTLDPKKVKGKILVCLIRETNGLIYAEAQALSTGAVGLILANNKQRGNNIMAYAHLLPTSHINYTDGEHVYSYIKDTKTPMAYMTRAKTLLGVKPAPVIASFSSRGPNSIQPIILKPDITAPGVDILYAFTEAISPTGLPSDNRRIPYNIGSGTSASCPHVSGIVGLLKTLYPNWSPAALRSAIMTTAMILDDNNRPIMDQYKEEATPFAYGAGHIQPELAMDPGLVYDLNAVDYLNFLCGHGYNHTQMRMFSRKPHTCSKYYNMLDFNYPSITVPDLGKHSVKVTRTVTNVGSPGTYHVHVKAPDGVSVMVEPRSLTFSKVGEKKTFKVILKGSKGASSGYVFGYLWWSDGRHRVKSPLVVKHK. 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02856 403 CDD PA_subtilisin_like 1 120 - -
Seca6g02856 403 ProSiteProfiles Serine proteases, subtilase domain profile. 1 260 - -
Seca6g02856 403 Pfam Fibronectin type-III domain 305 400 IPR041469 -
Seca6g02856 403 Gene3D - 3 129 - -
Seca6g02856 403 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 400 IPR045051 -
Seca6g02856 403 Pfam PA domain 34 106 IPR003137 -
Seca6g02856 403 SUPERFAMILY Subtilisin-like 135 305 IPR036852 GO:0004252|GO:0006508
Seca6g02856 403 Gene3D - 277 402 - -
Seca6g02856 403 Gene3D Peptidase S8/S53 domain 130 273 IPR036852 GO:0004252|GO:0006508
Seca6g02856 403 FunFam Subtilisin-like protease SBT1.5 277 403 - -
Seca6g02856 403 ProSitePatterns Serine proteases, subtilase family, serine active site. 191 201 IPR023828 -
Seca6g02856 403 Pfam Subtilase family 133 252 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02856 Seca-Chr6 93835288 93840063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02856 2 401 Subtilisin-like Serine Gene Family AT5G59810 56.359 4.09e-152 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02856 - - pcin:129318364 585.104