Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02833 ATGGCTGGTGGGTACGATCACGTTGCCAACATTTTTCCTGGGAGGCAAAATTGGAGGTTGAGAGTGAGAGTGGTCCGTTTATGGAACATGTTTCCCATTGATGAACCATCCAGAACATTTTCTATTGAGATGGTTTTGGTTGATGAAATGGGGGAGAGGATTCAAGCTTCTATCAGAAAACCAATGATTAAGAAGTTTGGGTGTAGTGTCATTGAAGGGGAAGCTTACAAGATGCATTTCTTTGGTATAGTTCGCAATCTTGGATCATACAGGGCTACCAAACATGAGTACAAACTCATTTTCCATGCCAAAACCAAAATAAGTAGGTGCGAAGCTTCCAGTCTTCCTTTACACGGGATCTGCCCCATGAATTCTGAGGATATTATGAGAACAAATGGGCAAAGTGATTACCTCGTGGATGTGGTTGGAGTTTTGACTGCTATATCTGCGGAGAAACGTTCTTTCCGCGATGGACGCATGACAAGGGTGATGCAGATGGAACTGACTGACGACAAGGGAAAGGTCCAGTGCGCAATGTTTGGGAGTTATGTTGATATGGTTGGCGACCTTTTAACTGGTATGGGTCCCGAGTTACCTGTTATGGTCGTCATGTTTGCTAAGGTCAAGCTATACAAAGGTTTGTTTGTAATCATGTAG 657 0.4353 MAGGYDHVANIFPGRQNWRLRVRVVRLWNMFPIDEPSRTFSIEMVLVDEMGERIQASIRKPMIKKFGCSVIEGEAYKMHFFGIVRNLGSYRATKHEYKLIFHAKTKISRCEASSLPLHGICPMNSEDIMRTNGQSDYLVDVVGVLTAISAEKRSFRDGRMTRVMQMELTDDKGKVQCAMFGSYVDMVGDLLTGMGPELPVMVVMFAKVKLYKGLFVIM. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02833 218 Gene3D - 5 110 IPR012340 -
Seca6g02833 218 SUPERFAMILY Nucleic acid-binding proteins 127 214 IPR012340 -
Seca6g02833 218 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
Seca6g02833 218 CDD RPA1_DBD_A_like 19 107 - -
Seca6g02833 218 Gene3D - 123 217 IPR012340 -
Seca6g02833 218 Pfam Domain of unknown function DUF223 43 112 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02833 Seca-Chr6 93530167 93531042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02833 8 216 Core DNA Replication Machinery Family AT2G06510 22.273 1.92e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02833 - - lja:Lj0g3v0341019.1 204.527