Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02802 ATGGACATGGCAGCAGCAGACTCCAACGCTAATTATCGCCATACGTTCGAACGTTACCTTCATGATTATCTTATCAAAAGAAACATGCACCAAACCGCTGAGAATTTCAGGAATGAGGCTAATCTCCAGCTCGACCCCAACGATGCTTCAACAATTGATGTTCCAGAAGGATTTTTGCTTGACTGGTGGTCATTCAGCTTGGACTATGACTTCTTTAGAGAGTACCTACAAATGCATGAGGAACAAAAGATAGAAGCCACACAAGAATGTGATGCTCTTCAAGCAGAAGAGTATTCCAATTATGAAGAAGCAATGAATGAAGTGATGTACACTGAAGAGTTGGTGGACGAATTGGTTTATCCCAGTATGTTTCTTTGTCTGCCTCATTTGCCAATAGCTACTTAG 405 0.4148 MDMAAADSNANYRHTFERYLHDYLIKRNMHQTAENFRNEANLQLDPNDASTIDVPEGFLLDWWSFSLDYDFFREYLQMHEEQKIEATQECDALQAEEYSNYEEAMNEVMYTEELVDELVYPSMFLCLPHLPIAT. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02802 134 Coils Coil 76 96 - -
Seca6g02802 134 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 14 114 IPR044716 GO:0003714
Seca6g02802 134 Pfam LisH 20 40 IPR006594 GO:0005515
Seca6g02802 134 ProSiteProfiles LIS1 homology (LisH) motif profile. 12 44 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02802 Seca-Chr6 93194019 93197373 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Seca6g02802 LisH 6.3e-05 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02802 - - ccaj:109805542 102.064