Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02779 ATGAAAGGTATGAACCTTGTGGATTTCAGCCCCAATGATATCATAAAATATGACTTTGGTAGTTTGGAGTTAGCTTTTGAATTCTATGGTTCCTATGCACGTATAAATGGATTTTCTGCACGTAAAGGGAAGACTATCACTAGTAGAAGATCAGGTAGGATTTTACAACAGAATTTCTTTTGCTATAAAGAAGGTCAACGAGATCCAAATGGTGTGCCGGAGGCACAACGTCAGCGTGAGCATAAAGCAAAAACTAGATGTGGTTGTAAAGCTTAA 276 0.3804 MKGMNLVDFSPNDIIKYDFGSLELAFEFYGSYARINGFSARKGKTITSRRSGRILQQNFFCYKEGQRDPNGVPEAQRQREHKAKTRCGCKA. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02779 91 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 91 - -
Seca6g02779 91 MobiDBLite consensus disorder prediction 67 91 - -
Seca6g02779 91 Pfam FAR1 DNA-binding domain 27 91 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02779 Seca-Chr6 92811484 92811759 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g02779 FAR1 5.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02779 - - mtr:112420123 89.7373