Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02732 ATGGTGGCAACAAGAGTTGGGGCGAACCATGGTGTGTTAATTAAAGGAGGATATTCCTTGGAAAGAGCTCAGATGGTGAAGTATGTTGTATTTGATAAAACAGACACTTTAACTCAGGGGAAAGCCACTGTTTCTGTTGCCAAGGCTAAAAAGGGAGTGAACAAATGGCTCTTGGTTGCTTTAGGCTTTGGAAGACAACTATTAAGGGTACATTTTCATGAAGATGGGAATGGGAACATCTTCAACTCCATGATTGCAAGCCTTTTCAGTCTTATATAA 279 0.405 MVATRVGANHGVLIKGGYSLERAQMVKYVVFDKTDTLTQGKATVSVAKAKKGVNKWLLVALGFGRQLLRVHFHEDGNGNIFNSMIASLFSLI. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02732 92 PANTHER ATP7, ISOFORM B 1 51 - -
Seca6g02732 92 Gene3D - 1 60 IPR023214 -
Seca6g02732 92 SUPERFAMILY HAD-like 19 50 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02732 Seca-Chr6 92026064 92028194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02732 1 48 Primary Pumps ATPases AT5G44790 72.917 4.74e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02732 K17686 - gmx:100798164 82.0333