Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02725 ATGGATACAAACTTGACTCTCAAAGTTGGTCTTGAATTCGGTAATTTAGAAGACACATGGAAATTTTGGGTTAATTACAGAGGCCTAAAAGGTTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTTCGTTACGTCTTACTTATATGTTTGTTATAAGGAGGGTGTAAGAAAACCAGACTCAAGGGATTATAAAATGACCAATCCAAAACCCGAGACAAGAACAGGGTGTATGACAGGAATGAAAGTCAAAAGATTCAATGAAATATACAGAGTGATTAATTCTTTTGATGATCATAATCACCCACTCCAACTACCAGAAACAGTGCATATGTTAGCTTCTCAACAAAGAATAACTGAACATCAAGCATATGAACTTGAAGTGGTAGAAGATGCAGGGATTCAACAGAAAACCTCATTTGATTTGATGAGTAAATCTATAGGAGGTAGAGAGAATCTATGGAATACTAGACAAGATGCAAAGAATTATTTGAATTCTAGGAGGCAACAAGATATGGCTTATGGTGAAGCTGGGTATTTGCTACAATATTTCCAACAACAATTGATAGATAATCCTTCATTCTTCCATGCATACCAAATGGATTTGGAGGAGCAAATAACAAATGTATTTCGGGTCGATGCAAGAATGTTGTTTAACTATCATTGCTTTGGTGATGCCATTTCTTTGGATACTCTTAGATTATGA 717 0.3501 MDTNLTLKVGLEFGNLEDTWKFWVNYRGLKGFGVRKQYSSKSKKDGFVTSYLYVCYKEGVRKPDSRDYKMTNPKPETRTGCMTGMKVKRFNEIYRVINSFDDHNHPLQLPETVHMLASQQRITEHQAYELEVVEDAGIQQKTSFDLMSKSIGGRENLWNTRQDAKNYLNSRRQQDMAYGEAGYLLQYFQQQLIDNPSFFHAYQMDLEEQITNVFRVDARMLFNYHCFGDAISLDTLRL. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02725 238 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
Seca6g02725 238 PANTHER OS01G0519700 PROTEIN 4 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02725 Seca-Chr6 91968104 91968820 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g02725 FAR1 1.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02725 - - vun:114184605 368.622