Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02723 ATGACACCCTTTACTCTCGCTTTCTCCTTCGCTGCCATTTTCACCATAACCGCCGTCAACGGCCTCGGCTCCGCCTCCACCACCGCAATCACCTACAGCACCGCCACCGTCTGCGGCGTCGTTGCCGGACAGCCCGACCAGTACATCCAATGTTACCAAAACGGAAAACCCGTTCCCGTGATCCTTCCCAACGTTTCCTTCCAGTCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCGTTCCGGCGGCTTCAGCCTCCTCTGTTGGGACACCGCTGCACCAACATTGGAATTCCGACCCAGAAGGCTGTACCACAATAAGTCGGTGCAGTTGAGTGATGTAGCAGTTGGTGATGATCAAGTTTGTGCTAGAGAGTTGCACTCTGGTGTGGTGAGGTGTTGGAGGGGTGGTGGTGGTGAAAATGGGTTTGAGTTTCCTTCCCCTGGTGAAGGTTTCCGGTTTCGCAGCATCACTTGTGGGTGTGGTTTTTCTTGTGGGATATTGAAGGAGAACAACAGGGTTTTGTGTTGGGGTGAGGGTGGAAATGGTGGTGAGATTCAAAGACAGTTTGGGAATTTGTCCATGTCTACATTGGTTGCTGGGGTGTCACATGTTTGTGGATTGACCCTTAAAGGGGTTATGGTTTGTAGAGGAAACAATGGTTCTGCTCAATTGGGTGTTCCTTTCAGTTCACCTTCAATGTTTTCAGGCCTTGCTTTAGGAGCAGATTTCACTTGTGCTATTAGGCGCAGAAATGGACTTGTTTTATGTTGGGGTGGTGCAGCTAGTAGGTTTGGTTTTGATAATGATGTGATGCAAGGTGTTTCTTTTGAGTCAATTGTTGCTGGTTTGGATTTTGTTTGTGGGTTGACTACCAGGAATTTGTCTGTGATATGTTGGGGTCCTGGTTGGTCTTCTAAGCTTCATTTGCCTTGTAATGTTCCATTGGGAATGGTTCTTCCAGGTCCATGTGTTAAGGATGCTTGTAGTTCTTGTGGTATATATCCAAATTCTGGTGTGCTCTGTCATGGCTCTGGAAGTATTTGCTATTCATGCCAGACTGAGGTTCCACTAGCTGTGCCATTGCTACCATCATCACCACCACATGTTCCCAAGCAAAATTCTTCTTCAGCTGAAGAAAAAGACTATAAGGAATTGTTGGCATTTCTGATTGTTGGATCAGTTGGGGCATTTGCAGGTCTATGCACTATTCTTTATTTCCTTTGGATTGGAGCCAGAAGATTCTTAAAGACAAAAATTGATAATTCTGAGAGACCCACAAATACTGAGTCTGATGCCTATATGGATATAGCTCCCATGCCTAATCTTGGTTCTAATGTAACTGCATTAAGGAACAGTTCAAGATTGAGGAGTGGTTCATCATCAAAGCAACTAGACAGGACTGAGAGTTTCTCATTATGTGAACTAGCTGCTGTCACTAACAACTTCTCAGTGGATAATAAGATAGGTGCTGGAAGCTTTGGCAGTGTTTACAAAGGGATGCTAGCAGATGGTCGTGAAGTGGCAATTAAAAGAGGAGATACCTGCACTAAGAAGAAGAAATTCCAGGAGAAAGAAATTGCTTTTGATTCTGAATTGGCTTTGTTGTCCCGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGAATGATGAGAGGCTTTTGGTTTATGAGTACATGAGCAATGGATCACTCCATGATCATTTGCATGACAAGATTAATATTGAGAAAAGTAGCAGTATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCATTAGATGCTGCTAGGGGAATTGAGTACATTCACAATTATGCAGTACCACCTATTATTCACAGAGACATCAAGTCCTCAAATATACTTTTAGATTCAAATTGGAATGCTAGAGTATCTGATTTTGGATTGTCACTGATTTGGCCTGAGACACAGAAAGAATTGATGTCCACCAAAGCAGTTGGAACTGTTGGATACATAGACCCTGAGTACTATGTCTTGAATGTACTAACTACAAAAAGTGATGTTTATGGTTTAGGAGTGGTGTTGTTGGAGCTTCTGACAGGAAAAAGAGCAGTGTTCAAAACTGAAGATGGGTCATGTCCTATTGGGGTGGTGGAATATGCAGGGCCAAGGATAGCAGCAGGGGAGTTGTGGAATGTGTTGGATTACAGAGTTGGACAGCCAGAAGTCAATGAGGTTGAGTCTCTTGAGCTAATGGCTTACACTGCTATGCATTGTGTGAACTTGGAGGGAAAGGAAAGGCCTGACATGACTAATATCGCTTCTAATTTGGAGAGGGCATTGGCTTTTGTTGAAGGCAGCCCTGGTAGCATCTCTATATCTTCATTCTCTGCCCCACTTTAA 2376 0.4449 MTPFTLAFSFAAIFTITAVNGLGSASTTAITYSTATVCGVVAGQPDQYIQCYQNGKPVPVILPNVSFQSISGGRSFFCGLRSGGFSLLCWDTAAPTLEFRPRRLYHNKSVQLSDVAVGDDQVCARELHSGVVRCWRGGGGENGFEFPSPGEGFRFRSITCGCGFSCGILKENNRVLCWGEGGNGGEIQRQFGNLSMSTLVAGVSHVCGLTLKGVMVCRGNNGSAQLGVPFSSPSMFSGLALGADFTCAIRRRNGLVLCWGGAASRFGFDNDVMQGVSFESIVAGLDFVCGLTTRNLSVICWGPGWSSKLHLPCNVPLGMVLPGPCVKDACSSCGIYPNSGVLCHGSGSICYSCQTEVPLAVPLLPSSPPHVPKQNSSSAEEKDYKELLAFLIVGSVGAFAGLCTILYFLWIGARRFLKTKIDNSERPTNTESDAYMDIAPMPNLGSNVTALRNSSRLRSGSSSKQLDRTESFSLCELAAVTNNFSVDNKIGAGSFGSVYKGMLADGREVAIKRGDTCTKKKKFQEKEIAFDSELALLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLHDHLHDKINIEKSSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETQKELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVLLELLTGKRAVFKTEDGSCPIGVVEYAGPRIAAGELWNVLDYRVGQPEVNEVESLELMAYTAMHCVNLEGKERPDMTNIASNLERALAFVEGSPGSISISSFSAPL. 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02723 791 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Seca6g02723 791 Gene3D Transferase(Phosphotransferase) domain 1 565 776 - -
Seca6g02723 791 SUPERFAMILY Protein kinase-like (PK-like) 460 768 IPR011009 -
Seca6g02723 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Seca6g02723 791 ProSiteProfiles Protein kinase domain profile. 484 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02723 791 Gene3D - 193 378 IPR009091 -
Seca6g02723 791 FunFam Serine/threonine-protein kinase-like protein CCR4 565 782 - -
Seca6g02723 791 Gene3D - 33 192 IPR009091 -
Seca6g02723 791 SMART serkin_6 484 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02723 791 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 194 778 IPR044815 GO:0004674
Seca6g02723 791 FunFam receptor-like protein kinase FERONIA 448 564 - -
Seca6g02723 791 SUPERFAMILY RCC1/BLIP-II 55 310 IPR009091 -
Seca6g02723 791 Pfam Protein kinase domain 485 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02723 791 Gene3D Phosphorylase Kinase; domain 1 446 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02723 Seca-Chr6 91945199 91947574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02723 4 783 Receptor kinase-like Gene Family AT3G55950 53.202 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Seca6g02723 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02723 - - gmx:100776682 1129.39