Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02720 ATGAAGCTCACAACTTCAACTTCTTCTTCTCATGCACCCCCACCATCTTCCTCCACCACAACTATGTGCAACTCCAAAAGCTCCACTCCAGGGTGTCTCACAGCCATCTTGCGCAAGATTCTTTGCTCTAGTGGCCTTCCAAAAGACCCATCAGATCAAATCAGAGAACTTGATTCATCAAATTCAATGGGGAGTGAAAAAGATCAAAACTTGAAGGCTAAGCAGAATGCTGAAGCTGAGGCTGGGGCTGCTGCTACTACTACTACTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGAATCAACACCAGTTTCTCTTTCACGTAGCCGATCCATGAATTCTGTGGACTATTTGGGAGAATGCAATAGAATGCATGATCTGCATAAGCGGGTTAAGTCCACATTGTCTTTTAGGGAATTGCCAACTTTTCTTTTAATTGAAAATGACAACTTTTTGGTGCTTAGTTTTGAAAATGGAGGTGAGAACAGGGCATTCAAATCCAATGGGAGAAAAAGAGAAATGGGTTGTGCAGAATTGAAGCAGAAAGTGGCAACAGAGAGAGAGAGAGGTGAGTTGAAGGAAGATAAGAGAGAAAAAGTGTGTGATAAGAAGAATTTGAGTAAGAAAGGGAAACTGAGGAGCAATAGGGTGTCTGATATGTCTTGTGGGAATATTGGAAGTGATGTTAAACTTCAAGAAATCACCAACACTTCGCATCAGTTCAAGGCTTCATCTAAAAAGAAGTGTTTTGATTCAGAAGGGGTGAAATTGGCACACCCCATGAACCGCAAGGAAGCTGTGATTAGTGAAAAGAAGAGGAGAAGGAAAAAGAAAACAAATTGTTACACAGAAAACAAGATAGAAATTGAATGCAAGTCAGAAGATTCAAGTCCTGTTTCTGTCCTTGATTTTGAGCGTGAAGCTTCTGGAACAGTTGGTTTGAGTTCAAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAACACTTTCCTCTGCGTTCTGATGGTAACTTGATGATTGATGAGAGGAAAGATAAGGCAATTGAGAACAACAAATATGAAGGATCAAAGAAAAAGGAAAAGCACAGCAAGGAGTATATAGATATTTGGAGTGAAGTTTGCAAGCTAGTTGAAGGTGAATTGGCTGAATCATATCAGATTCATGCATGGATCAATAAACAATGTGATTTAGAAAGCATAAGTGCAGAATTTGAGTCAGAAATTTTTGATCTTTTGTTAAATGAGCTGATGGATCAACTTGTTGGGCATCCACACACAAGTTTGTAA 1287 0.3986 MKLTTSTSSSHAPPPSSSTTTMCNSKSSTPGCLTAILRKILCSSGLPKDPSDQIRELDSSNSMGSEKDQNLKAKQNAEAEAGAAATTTTPGIVARLMGLESTPVSLSRSRSMNSVDYLGECNRMHDLHKRVKSTLSFRELPTFLLIENDNFLVLSFENGGENRAFKSNGRKREMGCAELKQKVATERERGELKEDKREKVCDKKNLSKKGKLRSNRVSDMSCGNIGSDVKLQEITNTSHQFKASSKKKCFDSEGVKLAHPMNRKEAVISEKKRRRKKKTNCYTENKIEIECKSEDSSPVSVLDFEREASGTVGLSSRRKLSPELENDQHFPLRSDGNLMIDERKDKAIENNKYEGSKKKEKHSKEYIDIWSEVCKLVEGELAESYQIHAWINKQCDLESISAEFESEIFDLLLNELMDQLVGHPHTSL. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02720 428 MobiDBLite consensus disorder prediction 48 86 - -
Seca6g02720 428 Pfam DUF761-associated sequence motif 87 103 IPR032795 -
Seca6g02720 428 PANTHER OS05G0128300 PROTEIN 17 424 - -
Seca6g02720 428 MobiDBLite consensus disorder prediction 1 29 - -
Seca6g02720 428 MobiDBLite consensus disorder prediction 313 336 - -
Seca6g02720 428 MobiDBLite consensus disorder prediction 56 70 - -
Seca6g02720 428 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02720 Seca-Chr6 91836862 91838574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02720 25 421 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 28.049 5.00e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02720 - - gmx:102660067 511.916