Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02703 ATGACTTGTTCCGTCGCTGTTCCTACTTCCCCTGTGTTCTCTCTCTCTTCTAACCTCTTCTACAGCAAAAGCTCTGTCATTTCTTCATCCCAGGAACCCCTTACGCTCGCGCTTCCCGTTCTCAACCCTCCTTTTACGACACCGTCTTGCTCATCACCCTCTCCACCTTCCTCGCCTGTGTTGAAGAGGAAGAGACCGGCCAAGCTTGACATTCCCGTTGCTTCTCTCACTTTTGGAGTTCCGGTGACGGCATCGCCGCCGGCGAGGGATGTTGTCGAGGTGGAGGGACGTGGGTTTTCTGTGTACTGCAAGAAAGGAAGGAGAAGACACATGGAAGACCGTTATTCTGCTGCTGTTGATCTTCAAGGAGAACCAAAACAGGCTTTTTTTGGCGTATTTGATGGGCATGGAGGTACAAAAGCTTCGGAATTTGCTGCACATAACTTGGAGAAGAATGTCTTGGATGAAGTGATTAGGAGAGAAGAGAGTGATATTGAGGAGGCAGTGAAGCATGGTTACCTCACCACAGATTCTGATTTCTTGAAAGAGGATCTTTATGGTGGCTCTTGCTGTGTAACAGCATTGATTAGGAATGGTAACCTTGTTGTGTCCAATGCTGGTGATTGTCGTGCTGTTATTAGCAGAGGAGGTGTTGCTGAGGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGGATTGAGACTAAAGGTGGATATGTTGATATATGCCGTGGTGTTTGGAGGATCCAAGGATCTCTAGCTGTTTCTAGGGGAATTGGAGATAGAAACCTGAAACAATGGGTGATAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTCAACATGACTTGTTAATCTTAGCATCAGATGGATTATGGGAAAAGGTATAG 906 0.4691 MTCSVAVPTSPVFSLSSNLFYSKSSVISSSQEPLTLALPVLNPPFTTPSCSSPSPPSSPVLKRKRPAKLDIPVASLTFGVPVTASPPARDVVEVEGRGFSVYCKKGRRRHMEDRYSAAVDLQGEPKQAFFGVFDGHGGTKASEFAAHNLEKNVLDEVIRREESDIEEAVKHGYLTTDSDFLKEDLYGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETKGGYVDICRGVWRIQGSLAVSRGIGDRNLKQWVIAEPETKVLRIEPQHDLLILASDGLWEKV. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02703 301 PANTHER PROTEIN PHOSPHATASE 2C 65 300 IPR015655 GO:0004722|GO:0006470
Seca6g02703 301 CDD PP2Cc 97 301 IPR001932 -
Seca6g02703 301 SUPERFAMILY PP2C-like 98 300 IPR036457 -
Seca6g02703 301 Pfam Protein phosphatase 2C 100 301 IPR001932 -
Seca6g02703 301 Gene3D - 94 301 IPR036457 -
Seca6g02703 301 ProSiteProfiles PPM-type phosphatase domain profile. 98 301 IPR001932 -
Seca6g02703 301 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Seca6g02703 301 SMART PP2C_4 88 301 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02703 Seca-Chr6 91548260 91550538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02703 1 301 PP2C-type Phosphatase Gene Family AT2G30020 58.551 4.56e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02703 K17506 - gmx:100818903 467.618