Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02678 ATGGCGGCGTGCGTGACGGACATAGCTCGAGCCGCCGCATGCAGAGACAGTGCCGCGGCGGCGCACCTGAAAACAATCTCTGTGTTCACGATCTTCGTCACCAGCATGGTCGGAATGTCAACACCGGTGCTACTGGCGCGGTGGTTTCACGGCAAGTCCGTCTACGACACGGCGTTGTTGTTAATCAAGTGCTTCGCTGCCGGCGTCATACTCGCCACCTCGCTGGTCCACGTGTTGCCGGACGCTTTCGAGGCTCTCTCCGACTGCCACGTGGCATCGATGCACCCGTGGAAGGACTTCCCCTTCGCCGGCGTCGTGGCCCTCGTCGGTGTTCTAATGGCGCTGCTGGTGGACACCGTAGCAAGCTCGCACGTGGAGCACGCGCACTACGAGCGCGTGGAGATGGATGAGAAGGAGCTTGTTATCGGTATTGGTGGTGGTGGTGGAGAAGAAGAGAGGATGGAAGAGTTGGTGAAATTGAAGCAGAAAGTGGTGTCGCAAGTGTTGGAAATTGGAATCATCTTTCACTCTGTAATCATAGGAGTCACTTTGGGAATGTCTCAAAACGTTTGCACCATTCGACCACTCGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGGATGGGCCTTGGTGGCTGCGTTGCACAGCAGGCGGGGTTTAGCTTTAGCAAAGTGGCGTACATGTGTTTTATGTTCTCTGTGACAACACCAATGGGGATAATTTTGGGGATGATGTTGTTCTCAGTGACTGGTTATGATGATAGCAACCCTAATGCGTTGATCATGGAAGGGTTGTTAGGTTCAGTTTCTTCGGGGATATTAATTTACATGGCTCTTGTTGACCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATATTTGGTTGAAAAAAGTTTCTTTTATTGTATTAGCTCTTGGCTCTGCTGCAATGTCTGTTCTCGCCCTGTGGGCTTGA 969 0.5108 MAACVTDIARAAACRDSAAAAHLKTISVFTIFVTSMVGMSTPVLLARWFHGKSVYDTALLLIKCFAAGVILATSLVHVLPDAFEALSDCHVASMHPWKDFPFAGVVALVGVLMALLVDTVASSHVEHAHYERVEMDEKELVIGIGGGGGEEERMEELVKLKQKVVSQVLEIGIIFHSVIIGVTLGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQQAGFSFSKVAYMCFMFSVTTPMGIILGMMLFSVTGYDDSNPNALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNIWLKKVSFIVLALGSAAMSVLALWA. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02678 322 PANTHER ZINC/IRON TRANSPORTER 20 316 - -
Seca6g02678 322 NCBIfam ZIP zinc/iron transport family 10 322 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca6g02678 322 Pfam ZIP Zinc transporter 22 129 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca6g02678 322 Pfam ZIP Zinc transporter 155 319 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02678 Seca-Chr6 91009855 91011253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02678 1 322 Inorganic Solute Cotransporters AT2G30080 63.158 7.40e-151 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02678 K14709 - gmx:100784745 475.707