Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02666 ATGGAATTCAAGAAGTTCAGAATCCGAAGCTATGAGGGGCAATCTGATAGAGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAAGTAGGGCCAGCAGAAAGCGTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTACATGATGCTGGTAGCAGAGTTGGACAATGAATTGGTTGGTGTCATTCAGGGGTCTATAAAAGTGGTCACAGTTCAAGGTCATCCTCCAAAGGATTTAGCAAAGGTGGGGTATGTCCTTGGCTTAAGGGTATCCCCTCATCATCGGAGAAAAGGGATTGGCTCAAGCCTAGTGAGAAAGCTAGAAGAATGGTTCACTTGCAATGATGTGGACTATGCATATATGGCCACAGAGAAAGACAACCATGCCTCAGTTAGTCTCTTCATGGACAAGTTTGGCTACACCAAGTTTAGGACACCAGCTATTCTTGTTAACACAGTGAACCATCATTCACTTCATATCTCATCCAACATTGAGATAGCCAGGGTGAAGACTGAACAAGCTGAATATCTCTATAGAAGATTCATGGGGTCAACAGAGTTCTTTCCTAATGACATAGGTAATATACTTAGGAACAAGCTAAGTTTGGGGACATGGGTGGCCTATTTCAAAGGAGATAATATTATTGATTTTGGGTCAGATGGACAAGTCCCAAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGGGAAATATTCAAGCTAAGGCTAGGGAAAGCACCTTTTTGTTGCTTGTTATACACAAAGAGTTGGTGCTTGATTGATAAAATCTTCCCATGCTTGAAATTGCCTACCTTACCTGATTTCTTCAACCCATTTGGGTTTTACTTCATGTATGGGGTGTACCATGAAGGACCATTCTCTGGGAAGCTAGTGAGGGCTCTGTGTCAGTTTGTACACAACATGGCAGCAGAGTCCAAGGATGAGAATTGCAAGATCATTGTGACTGAAGTTGGAGGAAGAGATGAGCTCAATCATCATATCCCACATTGGAAATTGCTCTCATGCCCGGAGGACTTGTGGTGCATAAAGGCATTGAAAAATGAAGGGACAAACACGTTTCATGAATTAACCAAAACCCCACCAAAAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1161 0.4272 MEFKKFRIRSYEGQSDRAQVEDLERRCEVGPAESVLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVQGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRKLEEWFTCNDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNTVNHHSLHISSNIEIARVKTEQAEYLYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDNIIDFGSDGQVPNSWAMLSVWNSGEIFKLRLGKAPFCCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCQFVHNMAAESKDENCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGTNTFHELTKTPPKRALFVDPREV. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02666 386 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 386 - -
Seca6g02666 386 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 152 IPR016181 -
Seca6g02666 386 CDD NAT_SF 56 118 - -
Seca6g02666 386 Gene3D - 8 154 - -
Seca6g02666 386 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 161 IPR000182 GO:0016747
Seca6g02666 386 Pfam Acetyltransferase (GNAT) family 46 147 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02666 Seca-Chr6 90809277 90811684 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca6g02666 Acetyltransf_1 6.8e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02666 - - gmx:100799507 719.539