Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02658 ATGCAATTAAATATTGCCGCTCATATATCACCTTGCTTCCGTGTGAAGGAAGGAGATCATGTTATTATTGGTCAATGCAGGCCACTCTCAAAGACAGTGAGGTTGAACGTGTTGAAAGTGATCCCGGCTGGATCTTCTAATGGCGCAAAGAAGGCATTTGCTGGAATGTGA 171 0.4386 MQLNIAAHISPCFRVKEGDHVIIGQCRPLSKTVRLNVLKVIPAGSSNGAKKAFAGM. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02658 56 Pfam Ribosomal protein S17 4 39 IPR000266 GO:0003735|GO:0005840|GO:0006412
Seca6g02658 56 Gene3D - 1 55 - -
Seca6g02658 56 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 4 48 IPR000266 GO:0003735|GO:0005840|GO:0006412
Seca6g02658 56 ProSitePatterns Ribosomal protein S17 signature. 18 30 IPR019979 GO:0003735|GO:0005840|GO:0006412
Seca6g02658 56 SUPERFAMILY Nucleic acid-binding proteins 4 44 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02658 Seca-Chr6 90579801 90582421 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02658 4 56 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 83.019 1.11e-27 95.1