Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02652 ATGTGTGTGTGTGGAGTGGATCGAAATTCTCACTTGGGTATACTAGCTAGCTCTGCCATGTTCGTTATCTTGTTGTTACTTGTTTCTTCACCGTTAATTACTTTTACCATACTACTATTGAGCTTTCAAGGAATTATGGAAGGTGGTTCATCAAGCTCAAGCAATAGCGGTGTTCAAGGGCTGCCAAATCCACTTGTTGATGGAGATCCTCATATTGGTGATAATCAAGATCCTGACGAGCAAAGGCGTGCAGCAAACAGGGAATATGCACAGAGATATCGTGAAAGGCAACAAGTTCGTGTTGAAAGTCTTAAAAGTGAAGAAAAGACACTTGAAGAAGAAATATCCGGCAAATATTCTCCAGAGTTTAACTATTATAAAATCGTTGAATCAAATCTTGTGAATGAGTACCGTTCATTGCAAGAAATATTTACTCACGCTACTTCAGAGTTACAGGCTCACGAACTTGTGGAAGATAATATAAATCATGAAGTGGAGCAACTGAAGTCGATCAAAAGAGACCAACAAGTTCGAATCTCAGAGATCATGTCCAAGAAAAAAAATAAACCTCCTAAGGGGACTCATTAA 588 0.3878 MCVCGVDRNSHLGILASSAMFVILLLLVSSPLITFTILLLSFQGIMEGGSSSSSNSGVQGLPNPLVDGDPHIGDNQDPDEQRRAANREYAQRYRERQQVRVESLKSEEKTLEEEISGKYSPEFNYYKIVESNLVNEYRSLQEIFTHATSELQAHELVEDNINHEVEQLKSIKRDQQVRISEIMSKKKNKPPKGTH. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02652 195 SMART brlzneu 74 153 IPR004827 GO:0003700|GO:0006355
Seca6g02652 195 Coils Coil 94 114 - -
Seca6g02652 195 MobiDBLite consensus disorder prediction 52 82 - -
Seca6g02652 195 CDD bZIP 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02652 Seca-Chr6 90376204 90377229 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca6g02652 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02652 - K17388 gsh:117361448 37.3502