Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02635 ATGACTATAGAGAACTCAACTCCTGAATCTGATCATGCTAATAAGAGCCCCCTCAATGGTGGTAGTGCAACTTCAGGTGTTGGTGATGATGGCAAAGTTGCACAAACTGATAAAGGCCAAGCAGACCCACCTGCACCTCGCTCGGGCTGCAACACTCAACCAGAAATGGATCTTAAGAGGCTCGAAAGAATCATAGCAAACCGAGCTTCAGCACAAAGATCCAGGGTGAGGAAAATTGAATATGTGGCGGGCTTGGAAGAGAAAGCAAAAACTTACCAGATTGAGCAGCATAAACTGAAACTACAAATGGCTATTTATGAAAAAGAAAGAATACTTCAAGAAGTTGAGATTGAAAAGAACAAACAGGACATAAAAAGGCTAAACGAGCTCCACAAGCAACTTGAAACTGAAGCAAGGGAAAAGATGTTGAATAGGAGTGCACATCCAGTGCTGAATAGAAGTGCTATTGTGCAACTTATGTCCAATCCCAACATGAATCCTTTTGGCTTTGGACCGCAATTTTTCTTAAACTCATATCAAGTTCAAAATGGAGCAGGAACATCAAGAATGCAAACTGGTATAAGCCAAGGGCTTCAAAATGGAGCGAGAACATCAAGAATGCAAACTAGTATAAGCCAATGGCCACAAAATCAGAGCCACATGTGGACATATTTATGGAATAATGGACAGAGGTCAACTCCTGATTTGAACTAA 714 0.4132 MTIENSTPESDHANKSPLNGGSATSGVGDDGKVAQTDKGQADPPAPRSGCNTQPEMDLKRLERIIANRASAQRSRVRKIEYVAGLEEKAKTYQIEQHKLKLQMAIYEKERILQEVEIEKNKQDIKRLNELHKQLETEAREKMLNRSAHPVLNRSAIVQLMSNPNMNPFGFGPQFFLNSYQVQNGAGTSRMQTGISQGLQNGARTSRMQTSISQWPQNQSHMWTYLWNNGQRSTPDLN. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02635 237 Pfam bZIP transcription factor 57 109 IPR004827 GO:0003700|GO:0006355
Seca6g02635 237 Coils Coil 82 102 - -
Seca6g02635 237 Gene3D - 58 146 - -
Seca6g02635 237 SUPERFAMILY Leucine zipper domain 59 109 IPR046347 GO:0003700|GO:0006355
Seca6g02635 237 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Seca6g02635 237 MobiDBLite consensus disorder prediction 1 23 - -
Seca6g02635 237 CDD bZIP_plant_RF2 60 111 IPR044759 GO:0003700|GO:0006355
Seca6g02635 237 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 77 IPR004827 GO:0003700|GO:0006355
Seca6g02635 237 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 109 IPR004827 GO:0003700|GO:0006355
Seca6g02635 237 PANTHER BASIC LEUCINE ZIPPER 34 5 149 - -
Seca6g02635 237 Coils Coil 117 144 - -
Seca6g02635 237 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02635 Seca-Chr6 90052547 90055914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02635 57 127 bZIP Transcription Factor Family AT3G58120 43.662 1.76e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca6g02635 bZIP_1 1.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02635 - - adu:107458286 93.5893