Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02624 ATGTTAAGTGGACTACGCAGGTTTGTGCTATCATTTGCTCTTGGTGTCGGTCCAGTTCCTTGTCTCCTCATGTTTGAAATACTGCCTGGCAGGATCAGAGCCAAGGCAATGGCAATTTGCTTGATTGATAACTGGGAGACCAGCTTTGGGAATAATGAAGTGCAATATGCATTACAAGATGGAAAGCTGAAATCTGTGTTGGATCATTTGGCTGGAGAATGGCCATTTGTGCAAGGTGAACAATTGGCTTGTTTGGCTTTGAGGTGTTGTGATATGTATAGGAAGAGCAGATTGCAACATTTTCTAATTTTTGTTAATGATAATCAAAGCTTGGTTCCAAGAGCTTCCCAGTGCAACATAGAAGAAGAATATGTTGAGCTTATGAAGCAGCTAAACAAGTTCTTCCTAAACAACTGTGAAAAGAGTTGTATTGTACTGTCATAA 444 0.4009 MLSGLRRFVLSFALGVGPVPCLLMFEILPGRIRAKAMAICLIDNWETSFGNNEVQYALQDGKLKSVLDHLAGEWPFVQGEQLACLALRCCDMYRKSRLQHFLIFVNDNQSLVPRASQCNIEEEYVELMKQLNKFFLNNCEKSCIVLS. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02624 147 PANTHER OS02G0152300 PROTEIN 52 98 - -
Seca6g02624 147 Pfam Sugar (and other) transporter 8 49 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca6g02624 147 Gene3D MFS general substrate transporter like domains 1 78 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02624 Seca-Chr6 89977641 89979239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02624 51 97 U-box Gene Family AT2G45910 61.702 1.40e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02624 - - gmx:100807515 75.485