Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02620 ATGGGGCGGTGGGCGGTGGCCGAAAATGGTGATCAACATACAACAGCTGATGTGGGTTATACATCTTTTTTCAAGATCTGCATGCATCTCGTTAATTCCCTCTCAGGAATTGGTATTGTATCCATGCCTTACACATTGGCATTTGGGGGATGGTTAAGCTTATTGATGCTATTTGTGATCGCCATTCCTTGCTGTTACACTGGCATTTTGATCAAAAGATGCATGGATATGGATCCTGATATCAGGACCTTTCCTGATTTAGGTCAATGTGCATTTGGAGACAAGGGGAGGGTTATGGTATCAATCATTATGAATGTTGAGCTTTACCTTGTTGTAACAGGTTTTCTGATTTTAGAAGGAGACAATATAAACAAATTAGTACCAAACATGCATTTTCACCTTGCAGGGTTAAACATTAGTGGTAACACAATTTTTACCATAGTTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGAGCCTGCTATCTTATGTCTCTGCTAGTGGGGTTTTAGCTTCTTCCATCTTCATCCTCTCTTTATTCTGGAATGCCACCATTGATGGAACAAGATTTCATGGAAAGGGAACACTTCTCAGATGGAGTGGAATGCCTACTTCTATCAGTCTATATGCCTTTTGTTATGATTCTCATCCAATCCTTCCCACCCTCTACCATTCTATGAAAAACAAAATCCAGTTCTCCACAGTCCTGTTTGTATGCTTTTTAGTGTGCACTCTTGGTTATGCAGTAGCAGCTGTTTTGGGCTACTTAATGTTTGGAGAAGAGGTTGATTTGCAGGTGACTTTGAACCTCCAAACAAGCAAGTGGAGTTCACGAGTGGCAATATGCACTACCTTGATCAACCCCATAACCAAATATGCATTGACACTTACTCCAGTCTTAAATGCCATAAAAAGTAATGTTCCATGCCATTACAACAAAAGGCTCACACATATACTTGTCAGTACCTCCGTACTAATCAGTTCTCTTATTGTTGCTGTGGCTATTCCCTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTAAGCATCTCGGCTTTATTTTTAGTGCCATCAGTGTGCTACTTGAAGATTTCAGGAACTTACAAGAGATTTGGGTTTGAAATGATCATCAATTATTCAATAATAGTAATGGGGGTTATTGTTGCTATTTTAGGTACTTATAGGTCTCTTAAAGATATCATTCAGAATTTATAA 1230 0.3919 MGRWAVAENGDQHTTADVGYTSFFKICMHLVNSLSGIGIVSMPYTLAFGGWLSLLMLFVIAIPCCYTGILIKRCMDMDPDIRTFPDLGQCAFGDKGRVMVSIIMNVELYLVVTGFLILEGDNINKLVPNMHFHLAGLNISGNTIFTIVAALVILPTVLLEDLSLLSYVSASGVLASSIFILSLFWNATIDGTRFHGKGTLLRWSGMPTSISLYAFCYDSHPILPTLYHSMKNKIQFSTVLFVCFLVCTLGYAVAAVLGYLMFGEEVDLQVTLNLQTSKWSSRVAICTTLINPITKYALTLTPVLNAIKSNVPCHYNKRLTHILVSTSVLISSLIVAVAIPLFGYLMSLVGALLSISALFLVPSVCYLKISGTYKRFGFEMIINYSIIVMGVIVAILGTYRSLKDIIQNL. 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02620 409 Pfam Transmembrane amino acid transporter protein 21 400 IPR013057 -
Seca6g02620 409 PANTHER OS05G0424000 PROTEIN-RELATED 23 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02620 Seca-Chr6 89934419 89939418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02620 8 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.618 1.03e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02620 K15015 - gmx:100784690 603.594