Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02619 ATGGCTGGTGATAGAAGCTCCTCCATGACTACCGTACCCTTGTTGGGTGATGAAGAAGAAGTGAATAATAATGATTCAAGTGAGGGAGCGGTGACAAAAATTGATGATATACACACAGTGGGTAGCACCTCCTTATTCAAGACTGGCTTCCATCTTGTTAATGCTATCTCAGGAGTTGGTATTGTATCAATACCTTATGCATTGGCATCTGGGGGATGGTTAAGCATATTGCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGAATATTGGTCAAAAGATGCATGGATATAGACCCTATTATCAAGACCTTTCCTGACATAGGTCACCGTGCATTTGGAGACAAAGGGAGACTAATGGTATCAATCATCATGAATTGTGAGCTATATCTAGCTGTAACAGGTTTTCTGATTTTAGAAGGAGACAATCTAAACAAACTAGCACCAAACATGCAATTTGACCTTGCAGGATTAACAATTGGTGGTGCAACAAGTTTTACCATAATTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGGGCCTTCTATCTTATATTTCTGCTAGTGGGGCTTTAGCTTCTTCCATCTTCATCCTCTCTTTATTCTGGAATGGCACCATTGATGGAACAGGATTTCATGGAAAGGGAACACTTCTTAGATGGAGTGGAATACCTTCTGCTGTCAGTTTATATGCCTTCTGCTATAGTGCTCATCCTGTCCTTCCTACCCTCTACAATTCAATGAGGAACAAAAGTCATTTCTCCAGGGTTCTGTTTGTATGCTTTTCAGGATGCACCCTTGGTTATGCAATAGCAGCTATTTTGGGTTACTTGATGTTTGGTGAAGAGGTTGAATCACAGGTGACTTTGAACCTCCAAACAGGCAAGTTGAGTTCACGCATGGCAATATACACAACCTTGGTCAATCCCATAACCAAATACGCATTGATGCTTACTCCAGTCATAAATGCTATAAAAAATAAGGTTTCATGGCATTACAACAGAAGGGTCACACATATTCTTGTTAGTACCTCTTTGTTAATCAGTTCTCTTATTGTTGCTGTGGCCATTCCCTTATTTGGATACCTAATGTCACTTGTTGGAGCATTACTAAGTGTCACGGCTTCAATTTTAGTCCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTTTGATATGATTATCAATTATTCAATAATAGTAATGGGAGTTACTATTGCTATTGTAGGTACTTATAGATCTCTTATAGATATAATTCAGAATTTATGA 1296 0.3912 MAGDRSSSMTTVPLLGDEEEVNNNDSSEGAVTKIDDIHTVGSTSLFKTGFHLVNAISGVGIVSIPYALASGGWLSILLLFVIAIACCYTGILVKRCMDIDPIIKTFPDIGHRAFGDKGRLMVSIIMNCELYLAVTGFLILEGDNLNKLAPNMQFDLAGLTIGGATSFTIIAALVILPTVLLEDLGLLSYISASGALASSIFILSLFWNGTIDGTGFHGKGTLLRWSGIPSAVSLYAFCYSAHPVLPTLYNSMRNKSHFSRVLFVCFSGCTLGYAIAAILGYLMFGEEVESQVTLNLQTGKLSSRMAIYTTLVNPITKYALMLTPVINAIKNKVSWHYNRRVTHILVSTSLLISSLIVAVAIPLFGYLMSLVGALLSVTASILVPSVCYLKISGAYKRFGFDMIINYSIIVMGVTIAIVGTYRSLIDIIQNL. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02619 431 PANTHER OS05G0424000 PROTEIN-RELATED 47 420 - -
Seca6g02619 431 Pfam Transmembrane amino acid transporter protein 42 423 IPR013057 -
Seca6g02619 431 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02619 Seca-Chr6 89919423 89924628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02619 17 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.816 1.03e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02619 K15015 - gmx:100784690 662.529