Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02603 ATGGAAGGAGCAAAGAGTCGTCTCCGTCTTTTCGAGATGGATCTTCTTGACACCAATTCCATTGCCGCCACCATAAAGGGTTGTGCTGGCGTTTTACATCTCGCATGTCCTAATGTCATCGGTGAAGTCAAAGATCCTGAGAAGCAAATTTTGGAACCGGCGATTCAAGGGACGGTGAATGTGCTGAAGGCGGCGAAGGAAGCAGGGGTGGAGCGAGTGGTGGCGACGTCGTCGATCTCCGCCATCACGCCGAGTCCTAAGTGGCCAGCTGATAAGATTAAGGGAGAGGACTGTTGGACGGACCTTGACTATTGCAGGGAGAAAGCGTTATATTATCCCATTGCGAAGACTCTAGCGGAGAAAGCGGGCTGGGATTTTGCTAAGGAAACGGGTTTCGATGTGGTGATGATAAACCCTGGCACAGCCTTGGGCTACTTGATTCCACCAAGAATCAATTCCAGCATGGCTGTGCTTGCTGGCATTCTCAAAGGCGATAAAGAGACGTATGAAGACTTTTTTATGGGAATGGCTCACTTCAAAGATATAGCCATGGCACATATTTTGGCATTTGAGAACAAGAAAGCAGCTGGAAGGCACTTGTGTGTGGAAGCTATTCGTCACTATTGTGATTTTGTGGATATAATTGCAGACTTATACCCTGAATATAATGTGGTTAGAGTGCCAAAGGATACCCAACCAGAGTTGTTGAGAGCAAAGGATGCATCTAAGAAGCTAATTGATTTAGGTTTACAATTCACTCCTGCCGAAGAAATTATCAAGGATGCAGTGGAGTGTCTGAAGAGCAGGGGTTATGTCTAA 819 0.4664 MEGAKSRLRLFEMDLLDTNSIAATIKGCAGVLHLACPNVIGEVKDPEKQILEPAIQGTVNVLKAAKEAGVERVVATSSISAITPSPKWPADKIKGEDCWTDLDYCREKALYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGYLIPPRINSSMAVLAGILKGDKETYEDFFMGMAHFKDIAMAHILAFENKKAAGRHLCVEAIRHYCDFVDIIADLYPEYNVVRVPKDTQPELLRAKDASKKLIDLGLQFTPAEEIIKDAVECLKSRGYV. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02603 272 CDD FR_SDR_e 1 250 - -
Seca6g02603 272 Pfam NAD dependent epimerase/dehydratase family 7 197 IPR001509 -
Seca6g02603 272 FunFam Dihydroflavonol reductase 1 272 - -
Seca6g02603 272 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 263 - -
Seca6g02603 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 266 IPR036291 -
Seca6g02603 272 Gene3D - 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02603 Seca-Chr6 89609007 89614019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02603 1 272 Monolignol Biosynthesis Gene Families AT5G58490 62.868 3.73e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02603 - - gmx:100806281 466.848