Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02584 ATGACACTTGCAACATTTGCAGAATTTGGCATGGTAATTAACTTCTTTAAGATGGGGATGCAGGTAAATCCCAAATTGATCTTGAAGATTGAAAAGGAGGAAGTGGCAATTGGTATAGTAGGATACTTGTCTTCTTTTGTGCTTAGCAGTGTAGTTTTGAATGTTGTTGATATAATCTCCCCTTTGGGACCTCAAGATGGTGGAATTCATGGTTTGGTAATTGCTAGTGCTCAAACAGCATTTCCTGTTATAAGTAGCTTCCTCAATGAGATGAACATTCTCAATTCAGAGGTTGGACGCATGGCTTTATCCACTTCCATGGTTAGTGATGCATGCAATTGGGTATTTTATTTTGTCATAAAGAATGTTGGTAGTGCCTTGGAGCAAAAGTCATATAAACCTGTCCTGCAGATTGTTGTCTCATTTTGTTATTTCTCAATCTTATTCCTCATGCTAAGGCCACTGGTTATATGGATCTCCAACCGCAATCCAAAAGGAAAGCCTATGACACAAAACCATTTCTTATCAATCATTTGTATACTTCTATTTGTTGGATTCTCTGCACAAGTTGCTGGTCAACCTTCTTTCCTTGTTGCTTTTTGGTTTGGCTTGATCTTACCTGATGGTCCCCCTTTAGGTTCTGTTCTGGCAGAAAGGATTGATACTGTTGGTTCTGCTTTGATTGTTCCAGCTTACTGTACAATTAGTGGATTGAAGACAAATGTTCCTTCATTAGCAGGATCAAAGTCAGCAAGCATAGAGTTTATCATAATTGCAGGGTATATAGGAAAGTTTTTAGGCACCATTTTACCCTCACTTCATTTTAAGATTGGATTCAGGGATTCTTTTGCACTGTCCCTAATCATGTGTTGCAAAGGCATTATAGATCTCAACATATTCAACACATTATTGACCGTTAAGGAGGTACAAAACCTATATCAGGAGATCAATCAAGGACTCCCTGAACAACTCTCATCTCAAATTACTTGTGTGCATTCACAATGA 1005 0.3821 MTLATFAEFGMVINFFKMGMQVNPKLILKIEKEEVAIGIVGYLSSFVLSSVVLNVVDIISPLGPQDGGIHGLVIASAQTAFPVISSFLNEMNILNSEVGRMALSTSMVSDACNWVFYFVIKNVGSALEQKSYKPVLQIVVSFCYFSILFLMLRPLVIWISNRNPKGKPMTQNHFLSIICILLFVGFSAQVAGQPSFLVAFWFGLILPDGPPLGSVLAERIDTVGSALIVPAYCTISGLKTNVPSLAGSKSASIEFIIIAGYIGKFLGTILPSLHFKIGFRDSFALSLIMCCKGIIDLNIFNTLLTVKEVQNLYQEINQGLPEQLSSQITCVHSQ. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02584 334 PANTHER CATION/H + ANTIPORTER 2 303 - -
Seca6g02584 334 Gene3D - 1 314 IPR038770 -
Seca6g02584 334 Pfam Sodium/hydrogen exchanger family 3 297 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02584 Seca-Chr6 89231278 89233983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02584 1 297 Antiporter Super Family AT1G06970 32.107 9.86e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02584 K26731 - gmx:100804488 437.573