Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02583 ATGTCTCTCAACCACTCTTATGCTGCTCCATCCATGGAAGCAGGCCAGGACAAGCTCATTCACAATGCCCTGCATGTTGCAACAGAGTCACACCCACAGTTTGGAGGGTCTTTCATATGCCATACAATTAATCACATCAACTCTAGGGGACGCTGGTTAGGAGATGACCCACTTGACTTTTCTGTTCCTCTCTTCTTGCTTCAGCTTTTCCTCATGTTCATCTTCACCCGCTTAATTTACCTTATTCTCAAGCCCTTTGGTCAACCTTCTTTTGTTTCTCATATTCTTGGTGGTGTGACTTTAGGTCCTTCAATTCTTGGGCACAACTCAGCATTTGCAGACAGGATTTTCCCATCAAAAGGAAGAAATGTGCTTGATACCTTGGCATTTTTTGGTTTCATGTTATTCATCTTCATACTTGGGGTAAAGATAGATCCAACCATAATTTTTAGATCAGGTAGAAGGACTTTTACAATAGGAATTTTAGGCTTCTTTGTTCCTTACACTCTTGCTGGAATGGTTGTCTTTCTCCTCAATCGGTTTGCATCATTGGATGATGATGTTTCTAACGTGCTTCCTACTGTGGTAGAAATTCAATGCATCACATGTTTTCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAGATCCTCAATTCAGAGATTGGGCGGTTGGCCTCCTCTTCTTCACTAGTGTGTGATATTTGCTTCTGTATAGTTGCATCAATAAAGTTTGCTACTAAATTATCCTTCACAAAGTCAATAGGAGTAACTATTGGATCTATCTCATCCACCACTCTTCTTGTTTTGTTCATTGTGTTTGTTGTTCATCCAGCTGCATTATGGGCAATTCAACAAACACCAGAGGGGAAACCTGTTCAGGAAATTTATATTTGTGGGGTTCTTGTAACACTAATGTTCTGTGGATTCATGGGTGAAGTAATTGGCTTAAATGCAATTGTTGTATCTTTCATGGTGGGGCTGGCTATACCAGATGGACCACCATTAGGAGCAGCACTGGTAGATAAGCTTGACTGTTTTGTTTCAGTAGTGTTCATACCTATCCTTTTTGTTGTAGTTGGATTGAGGACAGATGTTTATGCCATACAAAAGATGAAGAATTGGGGGATAATTCAGTTAATTATTTGCATTGCTTTTTGTGGGAAAATCATAGGGTCTTTGTTGCCTCTCCTTTTCTGTAGGGTGCCATTTCGAGATGCCCTTTCTCTTGGTCTTATAATGAACTGCAAAGGGACTGTTGAATTGGCTTTGTTGATTGACTTGAAATTAAAAGATGCCATGAGTGATGAATGCTTTGCAATTTTGGTTCTTACTTTAGTACTTGTAACTGGTATTGTGGCACCTGTGGTGAAAGCTCTATATGATCCTTCCAGGAGGTTTCTTGCTTACAGAAGAAGGACAATCATGCATCACAACAATGATGAAGAATTGAGGATACTAGCTTGCATCCACAAACAAGATAATGTCTTGGCTACTTTGAACCTTCTTGCTGCTTCCAATCCCACTGAAGCAAGCCACATTGATTTAGTTGTGCTCCATCTTGTTAAGCTTGTAGGCCAAGCTTCCTCTCTTCTTGTTGCACATATGCCACGCGAAAATCCTAGTCAACGTCCTACTCAATCTGAAAAAATTTTCAGCTCATTCAGCAAATTTGAACAAGCATACAGGGGAAAAGTCACATTGCATTGCTATAAAGGCATCTCTCCATATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTCATAATCATTCCTTTTCATAAGCAGTGGATAATTGGAGGGATGACTGAGTCATCTTTTGCCTTCAAGCAACTCAACAAGAATGTTCTAGAGAAAGCTCCTTGCTCAGTTGGGGTACTAATTGATCGTGGCAGTCAGAAGAGATTTTGGTGTGGCTATATGAATGAATCAATATATCAAGTGGCTGTGTTCTTCTTTGGGGGTGCAGATGATAGAGAAGCACTTGCATATGCAAAGCGCATGTTGGATCAGCCTAATGTACATATTACTCTTTTTCATTTTTCATCTTCAATAGAGATTGTTGGTGGTACTGATAGGAGCAAAATTCTTGATACCCAAATCTTGAGTGAATTTAGGCTCAGTGGTTTCCGGAATGATAGAGTTTCTTACAAAGAAGAGATGGTAATGAAAGGAAGGGATGTGCTTTCAGTTATTGAATACATGGAGAACTTTTATGACCTTGTCATGGTTGGGAGGAGGCATGCAGATTCACAATTGATGTCTGAACTTAGAAAATGGAAACATGGAGAGTTGGGAATCGTAGGAGAGCTTCTTGCCTCTTTAAATATTGGAGACAAAACATCAATTTTGGTGGTGCAACAACAATTCAAATTTTGGGGATCACGTGATCCAGAGGACTCCACGCACTTGAGAAGAACCTTTGGAGCATTAACTTTGATTAAATCTGTTGAAATGGATGATGAAAAGCTAGATGACCTGAGTTCCACTGGAATGATTGGTAATGAGAAACTAGTATGTCAATATATTGAAAAACATGCAACAAGGGGAATATGGCTTGGAGATAATCCCCTCCATCACACCACATCTGTCCTCATAGTTCAAATTACTCTTATATTCATTATCAGTAGAATTACTCATCTCTTATTGAGGCCTTGTCATCAAACTCTTCTCATTTCACAAATTGTGGCTGGTATCATATTGGGTCCTTTGCTTCTAGGTAGAAACAAATCAGGTTATGAGTTGTTATTTCCAGCAGCAAGCAAAATGACACTTACAACATTTGCAGAATTTGGCATGATAATTCACTACTTTAAGATGGGGGTGCAGGTTGATCCCAAATTAATCTTTAAGATTGAAAAACAGGCAATGGTAATTGGCATAGTAGGCCATGTGACTTCTATAGTGCTTAGCAGTGCAGTTTTAAATGTTGTTGACATAATCAATCCTCTAGGATCTGAAGAGGCTAGTGTTCATGGTTTGGTAGTTGTTGGTGCCCTGACTGCATTTCCTGTTATAAGTAGCTTTCTCAATGAGATGAACATTCTCAATTCAGAGGTTGGACGCATGGCTTTATCTTCTTCCATGGTTAGTGATGTATGCATGTGGGTGCTTTATTTCGTAGTAGTCAATGCTGCTAAAGGCTGGGAACTGGCCTCATATAAACCTTTTCTACAATTGGGTTTCTCAGTTTTTTATTTTGCCATATTATTCTTCATGCTGAGGCCACTTGTTATATGGATCTCCAACAGAAATCCACAAGGAAAACCTATGACACAAAGCCATTTCTTGTCAATAATCTGTATACTTCTAATTGTTGCATTATCTGCAGAAGTTTCTGGGCAACCTCCTTTCATTGTTGCTTTTTGGTTTGGTTTAGTCTTGCCAGATGGTCCCCCTTTAGGTTCTGTTTTGGCAGAAAGGCTTGATACAGTTGGTTCTACTTTGATTGTTCCAGCTTATTGTACAATTACTGGGCTGAAGACAAGTGTTCCTTCATTAGGAGAATCAAAGTCAGCAAGAATAGAGTTTATCATTATTGCAGGGTATATAGGCAAGTTTGCAGGCACCATCCTACCCTCACTTCACTTTCAGATTGAATTCTGGGATTCTTTTGCACTGGCTCTAATCATGTGTTGCAAAGGCCTTATAGATCTCTCTTTGTACAACATACTATTAAACTCTAAGGACATAGGTGAATTGGGCTTCACCCTTATGATATATACTATGGTGATTGTAACCGGGTTTGCAACTATAGTTCTCTATTTTATATATGATCCTTCAAGGAGGTACAAAACCTATATCAGAAAATCAATCAAGGACTCACAGAAGGACCTTGATCTCAAAGTTCTTGTGTGTGTCCACAAGGAAGAAAATGTATATCCAATCATCAATCTTCTTCAAGCCTCCAACCCCACAAAGGACACACCTCTCTCAGTTTTTGTTGTGCATCTCATGGAACTCTCAGGCAGAGCAGCCTCTGTCCTTACTGTAAACAAGAGCACTAGCAAGTCATGTCATAGTAAAGAGGCTTCCTCTCAACACATAAGCAATGTCTTTGATCAATTTCAGATGCATAACAAAGGGTGTGTCACATTGCAGTGCTGTACTGCAATTGCACCATATGCAAGCATGCATGATGACATATGCTACATGGCAATGGACACTAAATCCAACATTGTGATTGTGCCATTCCATAAACAATGGTTCTTGAATGCAACTGTTGAGGATTCCAATGCATCAATTAGGACAATAAACCAGAAAGTTCTAAATAAAGCTCCTTGTTCTGTTGGAGTCTTGATTGACAGAAGCCAAATGCGTGGGAAACTATTAGTTGTATGTGAGAAATCATTTTGTGAAATTGCCATGATCTTCTTAGGTGGTGATGATGACCAAGAGGCACTGGCTTATAGTATACGCATAGCTCAACATCCAAATGTAAGACTAACAGTGTTTTGGATAAGGGTAAATTATCAACGCAAACATTGGAACATGAAGAACCCTTATGTTGATTTGGTGGAGCATACAAGGTATAGCAATAGCCATAAAGGGAAAGTGATCTTTAAGGAAGAGGTAGTGGAAGATGGGGCAGGAACAACACAAGTTATTCGAACAATGGAGGGACATTTTAGTTTGATCATAGTGGGTAGACACCATATACCAGATTCTCCATGTACATTAGGCTTAACAGAATGGTGTGAACTCCCTGAGCTTGGGCCAGTTGGCAACCTCCTAGCCACATCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAACCTTGTAACTATGATTTTCGGTGTATTAGGTGA 4830 0.3952 MSLNHSYAAPSMEAGQDKLIHNALHVATESHPQFGGSFICHTINHINSRGRWLGDDPLDFSVPLFLLQLFLMFIFTRLIYLILKPFGQPSFVSHILGGVTLGPSILGHNSAFADRIFPSKGRNVLDTLAFFGFMLFIFILGVKIDPTIIFRSGRRTFTIGILGFFVPYTLAGMVVFLLNRFASLDDDVSNVLPTVVEIQCITCFPVISCFLAELQILNSEIGRLASSSSLVCDICFCIVASIKFATKLSFTKSIGVTIGSISSTTLLVLFIVFVVHPAALWAIQQTPEGKPVQEIYICGVLVTLMFCGFMGEVIGLNAIVVSFMVGLAIPDGPPLGAALVDKLDCFVSVVFIPILFVVVGLRTDVYAIQKMKNWGIIQLIICIAFCGKIIGSLLPLLFCRVPFRDALSLGLIMNCKGTVELALLIDLKLKDAMSDECFAILVLTLVLVTGIVAPVVKALYDPSRRFLAYRRRTIMHHNNDEELRILACIHKQDNVLATLNLLAASNPTEASHIDLVVLHLVKLVGQASSLLVAHMPRENPSQRPTQSEKIFSSFSKFEQAYRGKVTLHCYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWIIGGMTESSFAFKQLNKNVLEKAPCSVGVLIDRGSQKRFWCGYMNESIYQVAVFFFGGADDREALAYAKRMLDQPNVHITLFHFSSSIEIVGGTDRSKILDTQILSEFRLSGFRNDRVSYKEEMVMKGRDVLSVIEYMENFYDLVMVGRRHADSQLMSELRKWKHGELGIVGELLASLNIGDKTSILVVQQQFKFWGSRDPEDSTHLRRTFGALTLIKSVEMDDEKLDDLSSTGMIGNEKLVCQYIEKHATRGIWLGDNPLHHTTSVLIVQITLIFIISRITHLLLRPCHQTLLISQIVAGIILGPLLLGRNKSGYELLFPAASKMTLTTFAEFGMIIHYFKMGVQVDPKLIFKIEKQAMVIGIVGHVTSIVLSSAVLNVVDIINPLGSEEASVHGLVVVGALTAFPVISSFLNEMNILNSEVGRMALSSSMVSDVCMWVLYFVVVNAAKGWELASYKPFLQLGFSVFYFAILFFMLRPLVIWISNRNPQGKPMTQSHFLSIICILLIVALSAEVSGQPPFIVAFWFGLVLPDGPPLGSVLAERLDTVGSTLIVPAYCTITGLKTSVPSLGESKSARIEFIIIAGYIGKFAGTILPSLHFQIEFWDSFALALIMCCKGLIDLSLYNILLNSKDIGELGFTLMIYTMVIVTGFATIVLYFIYDPSRRYKTYIRKSIKDSQKDLDLKVLVCVHKEENVYPIINLLQASNPTKDTPLSVFVVHLMELSGRAASVLTVNKSTSKSCHSKEASSQHISNVFDQFQMHNKGCVTLQCCTAIAPYASMHDDICYMAMDTKSNIVIVPFHKQWFLNATVEDSNASIRTINQKVLNKAPCSVGVLIDRSQMRGKLLVVCEKSFCEIAMIFLGGDDDQEALAYSIRIAQHPNVRLTVFWIRVNYQRKHWNMKNPYVDLVEHTRYSNSHKGKVIFKEEVVEDGAGTTQVIRTMEGHFSLIIVGRHHIPDSPCTLGLTEWCELPELGPVGNLLATSDFTFSVLVVQQQPCNYDFRCIR. 1610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02583 1609 Gene3D - 868 1272 IPR038770 -
Seca6g02583 1609 Gene3D - 64 466 IPR038770 -
Seca6g02583 1609 FunFam Cation/H(+) antiporter 15 64 467 - -
Seca6g02583 1609 FunFam Cation/H(+) antiporter 15 870 1271 - -
Seca6g02583 1609 Pfam Sodium/hydrogen exchanger family 72 456 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02583 1609 Pfam Sodium/hydrogen exchanger family 876 1260 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02583 1609 PANTHER CATION/H + ANTIPORTER 39 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02583 Seca-Chr6 89222531 89230032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02583 26 813 Antiporter Super Family AT2G13620 38.386 1.40e-176 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02583 K26731 - gmx:102665255 1231.47