Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02574 ATGGCAAATCAGAACAAGACACCCCTTTCCCTTGATATGAAGGAAGTTGTGATAATTAAACCGTCCAAGCCCACACCTTGTGAGATTCTTTCTCTGTCCACCATTGACAATGATCTTAATCTCAACATTCTCTGTCAAACCATTTATGTGTACCAAGCAAATCATGATTTCCCAAATGGTAAAGTAGAACTAGACCCTGCTTATGTGATCAAAGAAGCCCTCTCAAAGGCTTTGGTTTACTACTATCCCCTTGCAGGGAAGATAATAACTTTTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGGGTTCCATTCTTGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACTGCACAGAAATTGGTGTTTGATAACCCTTCTCAAGAGGAAACTAGTCCACATCCCTTGGTTTTCAAGGTGACTAAGTTTCTCTGTGGGGGTTTCACAATTGGAATGGGCTTGTCACACACTGTTTGTGATGGGTTTGGTGCATCTCAAGTCTATAGAGCTTTGGCTGAACTTGCAAGTGGAAAAAGTGAGCCTTCAGTGAAACCTGTGTGGGAGAGAGAGAGACTAGTGGGGAAAGTTCTTAAGGAACCACTCCAATTTCCCATAGATAAGACTTCAATGGCAATCTCACCATTTTGGCCAATTACAGAGATTTCACATGAATGCTTTAACTTGAGTGGTGAGAGCATACAAAGACTCAAAATGAAACTGATGAAGGAGAGTGATAGTGTGAAGGAAAGCTTCACAACTCTTGAAACACTTGGTGCTTATGTTTGGAGGTCAAGAGCTAGAGCTTTGAAATTGAGCACTGAAGGGAAAACTTTGTTCTGTTTAGCTGTGGGTGTGAGACACCTATTGGATCCACCCTTGCCTGATGGGTATTATGGGAATGCTTTTGTGGCCTCAAATGTGGTTCTAACAGTGAAAGAACTTAATGCAAAACCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAACAAAAAGCTTCCTTGTAATACTGAATATGTCAAATACTCAATCAACATGTTGGAGACAATGAGGAAAGAGAATTTTAGGGTTGAAGGAACAGGTGCATCTATGGTATTAACAGATTGGAGGCAACTGGGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTACCAGTGCCATGGAACATGTTTGGGTACGTTGATTTGTGCCTTTTCTTGCCTCCAAGTAAGTTGGATCCTTCAAGGAAAGGAGGAGTTAGGATATTTGTATCCCTCCCCAAAGCTTCCATGCCCAAGTTCAAGGAAGAGATGGAGGCCCTCAAGCTTATGAGAGGTGACGAGGGAAGCACCTAA 1383 0.4208 MANQNKTPLSLDMKEVVIIKPSKPTPCEILSLSTIDNDLNLNILCQTIYVYQANHDFPNGKVELDPAYVIKEALSKALVYYYPLAGKIITFDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTAQKLVFDNPSQEETSPHPLVFKVTKFLCGGFTIGMGLSHTVCDGFGASQVYRALAELASGKSEPSVKPVWERERLVGKVLKEPLQFPIDKTSMAISPFWPITEISHECFNLSGESIQRLKMKLMKESDSVKESFTTLETLGAYVWRSRARALKLSTEGKTLFCLAVGVRHLLDPPLPDGYYGNAFVASNVVLTVKELNAKPLSEVVKLIKENKKLPCNTEYVKYSINMLETMRKENFRVEGTGASMVLTDWRQLGLLEEVDFGWKASVNIVPVPWNMFGYVDLCLFLPPSKLDPSRKGGVRIFVSLPKASMPKFKEEMEALKLMRGDEGST. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02574 460 PANTHER ACYL TRANSFERASE 4 10 449 - -
Seca6g02574 460 Pfam Transferase family 11 449 - -
Seca6g02574 460 Gene3D - 230 447 IPR023213 -
Seca6g02574 460 Gene3D - 8 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02574 Seca-Chr6 89150472 89151854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02574 9 445 Monolignol Biosynthesis Gene Families AT5G48930 24.945 6.82e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02574 K20240 - gmx:100801843 768.074