Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02572 ATGGCATACCTGAAGCTCAAAACAAAGAATGTGCTACTTATCAAACCATCAAAATCCACTCCTCAATCTATTCTTTCTCTATCCACACTTGACAATATACCTGAACATGATATCCTATGCCAAACCATTCATGTATACCGATCAACAACCCATGATTTTGATCCAGCTCATGTAATTAAAGAAGCACTCTCAAAGGCTTTGGTTTATTACTATCCTCTTGCAGGTAGGATAGTGAGACACACTGATGGAAAACTCAGAGTAAATTGCACTACAGAGTATGGTGTTCCATTCTTGGAGGCAATTGCTAACTGCAACCTTTCTTCTCTTCATTACTTAGATGGAACTGACACAGAAATTGCAAAACACTTAGTGCTTGATCTTCCTTCTCAAGATCAAAGTTGCTACCAATTTCCCCTGGTGTTCAAGGTGACTAAATTTCTATGTGGGGGTTTCACAATTGGGATGGGGGTTTCACATGCTATTGTTGATGGCATTGGAGCTTCTCAATTCTTCCGAGCCATTGTTGAAATTGCAAGTGGAAGAACTGAGCCCTATGTGAAACCTGTGTGGGAAAGAGAAAGACTTGTGGGATCAATAACCAAACAACCACTTCAGAGTCCCATGGATATAGCCTCTGCTGCAGTTTCACCTTTTTTACCAACCATAGATATTGTGCATGATTGTTTCAAGGTGGAAAGAGAGATCATAACAAGGCTCAAGTTGAGTTTGATGAAGGAAAAGGAAAATTTCACTACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAGAGCCAGAGCATTGAAACTGAGCTACAATGGGAAAACTATGTTGAATGTCATAGTGGGAGCAAGACAACATTTGGATTCTCCTTTGCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAAATGTTGTGATGACAGTGAAGGAGCTCAATGAAAGGCCACTCTCAGAGATTGTGAAGCTCATCAGAGAGACAAAAAAGGTTGCTTTTACTGCTGATTATATCAGAAACTCAATCAACACTTTTGAGACAAAGCAAGAGGATTGTAACTTAGAGGGTACTGGTGCAGTCACGGTTCTGACAGAGTGGAAGCATTTGGGTTTCTTGGAAAAGGTAGATTTTGGAGGGAGTGAAGCAGTGAATATAGTGCCTGCACCATGTAACATGTTTGGATCTGTGGGTATGTGCATTTTCTCCTCTCCTTATAAATTTGATGATCCATCAATGAAAGGAGGAGTTAGGATTTTCACATCACTCCCCATTGCTGCGGTGCCTAAGTTCAGGGAGGAAATGGAAGCTCTCAGGCTTATCAAATGA 1326 0.408 MAYLKLKTKNVLLIKPSKSTPQSILSLSTLDNIPEHDILCQTIHVYRSTTHDFDPAHVIKEALSKALVYYYPLAGRIVRHTDGKLRVNCTTEYGVPFLEAIANCNLSSLHYLDGTDTEIAKHLVLDLPSQDQSCYQFPLVFKVTKFLCGGFTIGMGVSHAIVDGIGASQFFRAIVEIASGRTEPYVKPVWERERLVGSITKQPLQSPMDIASAAVSPFLPTIDIVHDCFKVEREIITRLKLSLMKEKENFTTFESLAAYVWRSRARALKLSYNGKTMLNVIVGARQHLDSPLPEGYYGNAIVDANVVMTVKELNERPLSEIVKLIRETKKVAFTADYIRNSINTFETKQEDCNLEGTGAVTVLTEWKHLGFLEKVDFGGSEAVNIVPAPCNMFGSVGMCIFSSPYKFDDPSMKGGVRIFTSLPIAAVPKFREEMEALRLIK. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02572 441 PANTHER ACYL TRANSFERASE 4 6 435 - -
Seca6g02572 441 Gene3D - 221 434 IPR023213 -
Seca6g02572 441 Pfam Transferase family 5 436 - -
Seca6g02572 441 Gene3D - 2 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02572 Seca-Chr6 89127983 89129308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02572 4 388 Monolignol Biosynthesis Gene Families AT5G48930 28.744 3.32e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02572 K20240 - gmx:100783730 538.11