Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02569 ATGCCTTCTGCTGCTTTTCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCTATAAATGGGACAAACACCAATTTCCCTGCTTACTCTTCCCAGTTGAAGCAGCTTCTTTCCATTTCCCAAGTTGAGCTCAATAACCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCAGGCCTTGCTTCTGTCTACCTCCCCCTTTGGCTTGTCCTCATAATCGGTTCATTTCTTGGGTTAATCGGTTATGGTGTCCAATATCTCTTCATAACTAATCAAATTGCCTCTCTTTCCTATTGGCATGTCTTCTTACTAACTTTTCTGGCTGGCAATAGCATTTGCTGGATTAACACAGTTTGCTATGTTGTCACTATAAGGAACTTTGTATCTGATCGCCAAGTTGCTGTGGGAATAACAACCAGTTACCAAGGTTTAAGTGCAAAGATTTATACCAATATTGTTGAGGCTGTTTCTCCTCACAAGAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCTTACCAGTGGTAGTTTGCCTAATAGCAACTCCTCTAGTAAGAGAAATTGAAGTCAAAAGTCCTAACCACATGAATGTTGGGTTTGCTGTGATGTTTGTTATTACAATTGCAACTGGAATATATGCTGTGATAAGCAGCTTGCAATTTGTCACAAGCAAAACATCCTCAATGGGTATCCTGATTGGTATTCTAGTGTCCCTTCTCTTGCCTCTGTTAGTTCCAGTTTCAGTGAAGATCAAGGAACTAGCAGGGTCATGGCATAAAGAAAGAGAAAGACTAAGAGTCTATCATTTTACTATGGAGGAGAACACTAATGAAGAGAGGGCAGAGAATGAGGTGAAAGAGGGTGAAGATAGCATAGAAGTTCAAGAGGATGGTGCTATGGAAGAAATTGGAGTGAAGTTAATGCTGAGAAGAACAAATTTCTGGTTATATTTCTTTGTTTACTTTTTTGGTGCCACAATTGGTTTAGTATTTCTTAACAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACTTCCTCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGCCGTCTCATTCCATCTCTTATGGACTACTTCTACAGGGGGAAAAGGTAA 1140 0.4061 MPSAAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVELNNLAFASDAGKLFGWFSGLASVYLPLWLVLIIGSFLGLIGYGVQYLFITNQIASLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFVSDRQVAVGITTSYQGLSAKIYTNIVEAVSPHKKARTFLFLNSLLPVVVCLIATPLVREIEVKSPNHMNVGFAVMFVITIATGIYAVISSLQFVTSKTSSMGILIGILVSLLLPLLVPVSVKIKELAGSWHKERERLRVYHFTMEENTNEERAENEVKEGEDSIEVQEDGAMEEIGVKLMLRRTNFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLMDYFYRGKR. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02569 379 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 375 - -
Seca6g02569 379 Pfam Nodulin-like 7 250 IPR010658 -
Seca6g02569 379 SUPERFAMILY MFS general substrate transporter 6 373 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02569 Seca-Chr6 89067609 89070049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02569 1 379 Nodulin-like Gene Family AT2G30300 49.096 4.03e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02569 - - gmx:100800763 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02569 6 89067609 89070049 Seca6g02569 6 89067609 89070049 ECH
Seca8g01430 8 24392947 24394976 Seca6g02569 6 89067609 89070049 PCT