Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02555 ATGGCTTTCAACTCACATTATAACAGATTTTGCTTCTCTGTTTTGTTTTCAATGTTGGCCATATCCTCTGCTCAGCTATCTTCAGATTTTTATGGAACAACATGCCCCAAAGCCCTTTCTACCATAAAATCTGCAGTGGCCAGTGCAGTTTCCAAAGAGCATCGCATGGGCGCCTCCTTGCTTCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTATTAGATGACACTTCGAGCTTCACCGGAGAGAAGTCAGCTGGTGCAAATGTGAATTCCCTGAGAGGTTTTGAAGTAATTGACGACATTAAAACTCAATTGGAGAATGCTTGTCCTGGAATTGTTTCTTGTGCAGACATTGTTGCTGTTGCTGCCCGTGATTCTGTTGTCGCAGTAAGTTCAATACAATATACTAATAATCAATTAACACATATATATACTCAGTTGGGTGGTCCATCATGGAGTGTTGGATTAGGCAGAAGAGATTCAACTACTGCAAGTAAAGATGCTGCCACTACAGATATCCCATCCCCTCTAATGGATCTTAGTGACCTCATATCTGCTTTTTCAAATAAGGGCTTTACCACCCAAGAAATGGTAGTCCTCTCAGGAGCTCATACAACAGGGCAAGCAAGGTGCCAGTTGTTCCGAGGCAGGATTTATAATGAGAGCAACATTAATTCAGACTTTGCAACATCAGTGAAGTCAAATTGTCCAAGCAGTGGTGGTGACAGCAACCTTTCCCCACTTGATGTCACCACCAATGTGTTATTTGACAATTCTTATTTCAAGAATCTAGTAAACAAGAAAGGGCTTTTACATTCTGATCAGCAACTCTTCAGTGGTGGTTCAACAGATTCTCAGGTCACTACCTATAGCACTAGCCCTTCAACTTTCTATACAGACTTTGCTAGTGCCATGGTCAAAATGGGAAATCTCAGCCCTTTAACAGGGAAAAGTGGCCAGATTCGTACTAACTGCCGCAAAGTCAACTAG 1008 0.4187 MAFNSHYNRFCFSVLFSMLAISSAQLSSDFYGTTCPKALSTIKSAVASAVSKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFEVIDDIKTQLENACPGIVSCADIVAVAARDSVVAVSSIQYTNNQLTHIYTQLGGPSWSVGLGRRDSTTASKDAATTDIPSPLMDLSDLISAFSNKGFTTQEMVVLSGAHTTGQARCQLFRGRIYNESNINSDFATSVKSNCPSSGGDSNLSPLDVTTNVLFDNSYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFYTDFASAMVKMGNLSPLTGKSGQIRTNCRKVN. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02555 335 Gene3D Peroxidase, domain 2 180 314 - -
Seca6g02555 335 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 FunFam Peroxidase 180 314 - -
Seca6g02555 335 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca6g02555 335 ProSiteProfiles Plant heme peroxidase family profile. 25 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 Gene3D - 29 332 - -
Seca6g02555 335 PANTHER PEROXIDASE 72-RELATED 18 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 SUPERFAMILY Heme-dependent peroxidases 25 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 Pfam Peroxidase 43 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02555 335 CDD secretory_peroxidase 25 334 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02555 Seca-Chr6 88875471 88877886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02555 21 335 Peroxidase AT5G05340 60.252 9.28e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02555 K00430 - gmx:100818176 535.798