Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02549 ATGGCTTCTCATCATCTCCAATATTTCCTTGTGTTTTCCATGGTAGCACTTTTAACAATCCCATCCCATGCAAAACTCACTCCTGATTTTTATGACAAAGTATGCCCTCAGGCATTGCCAATCATTAAGTCAATTGTTCAGCGAGCAATCTCCCGTGAGCGACGCATGGGAGCATCTTTACTCCGTTTGCATTTCCATGACTGTTTTGTCAATGGCTGTGATGCATCAGTTTTGCTGGATGAAGCCCCAAACTTCCTTAGCGAGAAGATTGCCGCCCCAAATATGGGTTCACTGAGAGGTTTTGAGGTCATTGATGAGATTAAAGCAGCGGTTGACAAAGCTTGCAAACACCCTGTTGTATCATGTGCTGATATCTTAGCTGTAGCCGCTCGCGATTCCATCTCCATTTTGGGAGGTCAACTCTATTGGTACAAAGTGTTATTAGGAAGAAGAGATTCAACAACTGCTAGCATGGATGCTGCAAACACCAATCTTCCACCCCCATTTTTCAGTTTCTCACAGCTTCTTACTAATTTTCAATCTCATGGTTTGGGCCTTAAAGACCTGGTGGCTCTCTCTGGTGCCCACACCATTGGACTTGCCCAGTGCTCTATCTTTAGGAACAGGATCTACAATGAAAGCAACATAGATCACAAGTTTGCATCTTCTTTACAAAGGACGTGCCCTCTGATTGGTGGAGATAGCAATTTGGCAGCAATGGATTCCACTCCCACAAGATTTGACACTTCATACTACAAGGGTTTGCTTCATAAAAAGGGTCTCTTTCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTAGTGAAAGTGACAGATTGGTGAAGCTCTACAGCAAAAGCTCATCTGCTTTTGCTAGAGATTTTAAAGCTTCCATGATCAAAATGGGTAACATGAAGCCTCTTACTGGGAAGCTTGGACAGATCAGAGTCAACTGCAGAAAAGTCAACTAA 969 0.4324 MASHHLQYFLVFSMVALLTIPSHAKLTPDFYDKVCPQALPIIKSIVQRAISRERRMGASLLRLHFHDCFVNGCDASVLLDEAPNFLSEKIAAPNMGSLRGFEVIDEIKAAVDKACKHPVVSCADILAVAARDSISILGGQLYWYKVLLGRRDSTTASMDAANTNLPPPFFSFSQLLTNFQSHGLGLKDLVALSGAHTIGLAQCSIFRNRIYNESNIDHKFASSLQRTCPLIGGDSNLAAMDSTPTRFDTSYYKGLLHKKGLFHSDQELFKGDGSESDRLVKLYSKSSSAFARDFKASMIKMGNMKPLTGKLGQIRVNCRKVN. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02549 322 Gene3D Peroxidase, domain 2 166 301 - -
Seca6g02549 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 Gene3D - 29 319 - -
Seca6g02549 322 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca6g02549 322 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca6g02549 322 PANTHER PEROXIDASE 72-RELATED 23 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Seca6g02549 322 FunFam Peroxidase 166 301 - -
Seca6g02549 322 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g02549 322 FunFam Peroxidase 29 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02549 Seca-Chr6 88832272 88834320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02549 23 322 Peroxidase AT5G05340 54.125 3.98e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02549 K00430 - gmx:100816580 510.76