Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02545 ATGGCTTCACATCTCCAAAATGGGCTTGTGCTTGTTGTGGTCACTATGGCCTCATTGATGATCCCTTCTCACGCAACACTAATTCCTCATTTCTATGACAAAGTTTGTCCCCAGGCACTGCCAGTCATAAAATCAGTTGTTCAACGAGCAATTAATCATGAAAGGCGCATGGGAGCTTCCTTGCTGCGTTTGCATTTCCATGACTGCTTCGTTAATGGCTGTGATGGATCAGTTTTGCTAGATGACACTCGGAGCTTCATTGGTGAAAAGAATGCACTACCAAATAAGAATTCACTAAGAGGCTTTGAGGTGATTGATGAGATTAAAGCAGCGGTAGACAAGGCTTGCAAACACCCTGTTGTATCATGTGCTGATATCTTGGCTATTGCTGCTCGTGATTCTGTAGCCATATTAGGGGGTCCACACTTTTGGTACAATGTATTATTAGGCAGAAGAGATGCAAGAAGTGCAAGCAAAGATGGTGCAAACAACAACATTCCTGCCCCATTTTTCAGCTTCTCACAGCTTCTTTCAAATTTCAAGTCACATGGATTGGACCTCAAGGACTTAGTAGCACTCTCTGGTGGCCACACCATTGGCTTTGCTAAGTGCACTACCTTCAGGAGCAGGATCTACAATGCCACCAACATAGACCACAACTTTGCAGCCTCTTTGCAGAAAAAATGTCCTCGAATTGGTGGAGATAACAATTTGGCACCGTTTGATCCAACTCCTACAATGGTTGACACTATGTACTACAAGGAATTGATGTGTAAAAAGGGTCTCCTGCATTCAGATCAAGAGCTTTTCAAAGGAAGTGGTGGTGAAAGTGATAGATTGGTAGAGCTATACAGTAGGAACCCATTTGCTTTTGCTCAAGACTTCAAGGCTTCAATGGTTAAAATGGGTAACATGAAGCCTCTTACTGGGAATATGGGAGAGATCAGAGGAAATTGCAGAAGAGTTAATTAA 972 0.429 MASHLQNGLVLVVVTMASLMIPSHATLIPHFYDKVCPQALPVIKSVVQRAINHERRMGASLLRLHFHDCFVNGCDGSVLLDDTRSFIGEKNALPNKNSLRGFEVIDEIKAAVDKACKHPVVSCADILAIAARDSVAILGGPHFWYNVLLGRRDARSASKDGANNNIPAPFFSFSQLLSNFKSHGLDLKDLVALSGGHTIGFAKCTTFRSRIYNATNIDHNFAASLQKKCPRIGGDNNLAPFDPTPTMVDTMYYKELMCKKGLLHSDQELFKGSGGESDRLVELYSRNPFAFAQDFKASMVKMGNMKPLTGNMGEIRGNCRRVN. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02545 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Seca6g02545 323 FunFam Peroxidase 30 171 - -
Seca6g02545 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601|GO:0042744
Seca6g02545 323 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca6g02545 323 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 Gene3D - 30 320 - -
Seca6g02545 323 PANTHER PEROXIDASE 72-RELATED 24 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 Gene3D Peroxidase, domain 2 167 302 - -
Seca6g02545 323 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 FunFam Peroxidase 167 302 - -
Seca6g02545 323 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02545 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02545 Seca-Chr6 88770198 88772759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02545 24 323 Peroxidase AT5G05340 59.406 9.46e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02545 K00430 - gmx:100816056 532.717