Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02542 ATGGCACGCTCTTCTTCTTCTTCATCATCAACCATTAATGTTGCATTAGTAGTGTTCCTGCTTCTTATTATTACAGGGACTTCTTCAGCTCACCAACTCTCTGAGAACTTCTATTCTAAGAAATGTCCAAAGGTTTTTGACATTGTAAAATCTGTTGTCAAATCTGCTATAGCCAAAGAACGTCGCATAGGAGCATCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTGATGGTTGTGATGGATCATTACTACTTGATGACACTTCATCCTTCAGAGGAGAGAAAACTGCACGTCCCAACAACAATTCTGTGAGAGGTTTTGAAGTAATTGATGCTATCAAGTCTAAGGTGGAGGCAGCATGCCCTGGTGTGGTGTCATGTGCTGATATCTTGACCATTTCTTCTCGTGACTCTGTTGTCATTCTTGGAGGACCTTTTTGGAAGGTAAAAGTTGGAAGAAGGGATTCTAGGACAGCCAATTTCACTGCAGCTAACAATGGTGTGATTCCAGCTCCCACTTCTAACCTCAGCAACCTTATCTCAACGTTTCGAGCTCAAGGGCTTTCTGCCAAGGACATGGTTGCCTTATCTGGAGCTCACACAATAGGGAAAGCAAGGTGTACTACTTTCAGAGGTCACATATACAATGACAGCAACATTGACAGATCATTTGCTAAGACTAGGCAGAGGAATTGTCCAAGGACTAGTGGCTCAGGAGACAACAATCTTGCAGTTCTAGACTTCAGAACTTCTACTCATTTTGACAACAATTACTATAAGAACCTCATCATCAAAAGGGGACTACTTCATTCTGATCAGCAGTTGTTCAATGGTGGATCTACTGATTCACTTGTTAGAACTTATAGCCAGAATAGTAAGGCCTTTGATTCTGACTTTGTTACTGCAATGATTAAGATGGGAAACATCAAACCCTTAACTGGGTCCAAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 987 0.4164 MARSSSSSSSTINVALVVFLLLIITGTSSAHQLSENFYSKKCPKVFDIVKSVVKSAIAKERRIGASIVRLFFHDCFVDGCDGSLLLDDTSSFRGEKTARPNNNSVRGFEVIDAIKSKVEAACPGVVSCADILTISSRDSVVILGGPFWKVKVGRRDSRTANFTAANNGVIPAPTSNLSNLISTFRAQGLSAKDMVALSGAHTIGKARCTTFRGHIYNDSNIDRSFAKTRQRNCPRTSGSGDNNLAVLDFRTSTHFDNNYYKNLIIKRGLLHSDQQLFNGGSTDSLVRTYSQNSKAFDSDFVTAMIKMGNIKPLTGSKGEIRKNCRRVN. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02542 328 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Seca6g02542 328 ProSiteProfiles Plant heme peroxidase family profile. 32 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 Gene3D Peroxidase, domain 2 171 307 - -
Seca6g02542 328 FunFam Peroxidase 36 182 - -
Seca6g02542 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g02542 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Seca6g02542 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Seca6g02542 328 Gene3D - 36 328 - -
Seca6g02542 328 FunFam Peroxidase 171 307 - -
Seca6g02542 328 PANTHER PEROXIDASE 72-RELATED 30 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02542 Seca-Chr6 88726021 88728681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02542 32 328 Peroxidase AT5G05340 69.697 1.19e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02542 K00430 - gmx:100813384 509.22