Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02529 ATGTATTCCAATAAAAAGGGCAAGGAAGATGGCAAAGCTGAGCATCGTTACATGGAAACCGACCCAACTGGTCGCTATGCCAGGGTTGGAGATATTCTTGGAAAAGGGGCAATGAAAACAGTGTATAAAGCAATTGATGAGGTCCTTGGAATAGAGGTAGCATGGAACCAGGTCAAACTCAATGAGGCACTTCGTACACCAGAGGACTTGGAGCGGCTTTATTTAGAGGTTCACCTCCTCAGTACCCTCAAGCACCAATCCATCATACGATTCTATACCTCATGGATTGATGTTGACAACAGGACCTTCAACTTCATTACAGAAATGTTCACTTCTGGGACACTCAGAGAATACAGGAATAAATATAAGCATATTGGCATACAAGCAATAAAGAGCTGGACTCGCCAAATCTTACAGGGTCTTGTTTATCTACATGAACATGATCCTCCAGTAATTCACAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCGTGGTTCCCAGCCAGCTCATAGTGTTATAGGTACCCCAGAGTTCATGGCACCAGAATTGTATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTCACATCTGAGTATCCATATAGTGAATGTGCTAATCCTGCACAGATATACAAGAAAGTGACATCGGGGAAGCTACCAGCAGCACTTTTCCGGATTGAAGACACAGAAGCACAGAAGTTTATTGGCAAATGCCTTGTAACTGCAGAAAAGAGACCGTCAGCAAAAGAATTGTTGAATGATCCATTTCTTGTGTCTGATGATGTGTCATCAATAACAAAGATTGCAATGCCAAATCCGTTTTTAAACTACAGTGAGATGGATAAACTTCAATTGAGGGATGATACACCTAGGACTGAAATGTCAATAACTGGGAAGCTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTGCTGACAAGGATGGTTCTGCTAGGAATGTATATTTTCCCTTTGACATTTTCTCTGACACCCCCATTGATGTTGCAACGGAGATGGTGAAAGAATTGGAGATCACAGATTGGGAGCCTTCTGAAATTGCAAATATGATAGAAGGAGAGATATCTTTGCTGCTGCCAAATAGGAGGAATAGTAACTGTTCAAATACCTGCCATACATTCAGTTATCAAGAAGATGATGATGATGAAGGTCCTCACCATCATTTCCACTCTGTCTCTTCTCGTTCGTCATCCCAAGAATCAACATCAGGGTTAGCCAGTAGAGTTGGTGACATATCAAATGGATGTTATTGGCTGCATGATGATATGCATGATGATGCCAGTTCACGATGCTCTTCACATGGGACATATTCCAACTTGAACTTTTGTTCTGTGGAAGACCAGGACTACAATGTGGCTTCTACAAGGAAAGATAAACATGCCATCATAAAGAGTCACCACAAGTGTACAAGGTTTCCACATGGTGAAGACCATATCACTTTAAACCAGTGCAAAGTTTTAGCTGGACCACAAGCACATTCTTTTAGTAAAAATAAGAGGATGATGGACAATCGTAGACTAACAAGGAACAATTCACTAATTGATATGAGGAGCCAATTACTACACAGATCACTGGTTGAGGAGGTAAACCGAAGGCGGCTATTCAAGACTGTTGGAGCTGTGGAAAATATTGGATTTCAGTCACCTTATGAGGTTACAAGCAAAATGTCACAGCCAGTATGCGGTGCTTTAGATGTGAAATCTTCATGGAGTGGCAAGGGACAAAACTTAAGAGCTCAAAAAAAGTAA 1857 0.4109 MYSNKKGKEDGKAEHRYMETDPTGRYARVGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLNEALRTPEDLERLYLEVHLLSTLKHQSIIRFYTSWIDVDNRTFNFITEMFTSGTLREYRNKYKHIGIQAIKSWTRQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAALFRIEDTEAQKFIGKCLVTAEKRPSAKELLNDPFLVSDDVSSITKIAMPNPFLNYSEMDKLQLRDDTPRTEMSITGKLNPEDDTIFLKVQIADKDGSARNVYFPFDIFSDTPIDVATEMVKELEITDWEPSEIANMIEGEISLLLPNRRNSNCSNTCHTFSYQEDDDDEGPHHHFHSVSSRSSSQESTSGLASRVGDISNGCYWLHDDMHDDASSRCSSHGTYSNLNFCSVEDQDYNVASTRKDKHAIIKSHHKCTRFPHGEDHITLNQCKVLAGPQAHSFSKNKRMMDNRRLTRNNSLIDMRSQLLHRSLVEEVNRRRLFKTVGAVENIGFQSPYEVTSKMSQPVCGALDVKSSWSGKGQNLRAQKK. 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02529 618 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Seca6g02529 618 Gene3D - 315 402 - -
Seca6g02529 618 MobiDBLite consensus disorder prediction 414 443 - -
Seca6g02529 618 CDD STKc_WNK 25 285 - -
Seca6g02529 618 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02529 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Seca6g02529 618 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02529 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 567 - -
Seca6g02529 618 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02529 618 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Seca6g02529 618 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Seca6g02529 618 MobiDBLite consensus disorder prediction 427 443 - -
Seca6g02529 618 SUPERFAMILY Protein kinase-like (PK-like) 28 317 IPR011009 -
Seca6g02529 618 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02529 Seca-Chr6 88557992 88563428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02529 17 591 MAP Kinase Kinase Kinase AT5G58350 61.618 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca6g02529 Pkinase 9.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02529 K08867 - gmx:100778102 991.49