Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02528 ATGGCGGATATTCCGACTGAATTGGCAAAGACAGGTTTGGAGAGATTGATGAATGCCGCAATAGAGGAATCACGTTATATGTGTTGCTTTACATGCATTGCTGAGGACTTTGAAAAGGAAAAAGAAACATTGAAAGCGAAAAAGAAGACTGTGGAGCAACGTGTTCAAGTGGCAAAAAATAAGGGAGAAGATATACGAAGTGATGTCACTCATTGGCAAGATAATGCTGACAAACTCATTCAAGAGGATCATGACACCAAAACCAAAAAGACATATTTTTTTGGATTGTGTCCTGATTTCAAATGGAGATATAGTAAGGGAAAGGATTTGGCAAATAAAACAGGGGAGATTAAAGGACTAGTCTTGGAAAGTGGTAACTTTGAAAGTAGTGTTGGACTCCCTTCTCATCTTCCAGGCGTTGAATATCATTCTTCCCAATACTACATTCCTTTTAAAAGTAGAGAGTCAAAATATAAGGAACTTTTGGATGCACTAAAAGATGACAACAACTATATAACTGGATTGCAAGGGATGGGGGGCACCGGGAAAACTATATTGGCAAAACAAGTGGGTAAGGAACTCAAGGTATCCAAACAATTTGATCAAGTCATCGATACAACAGTGTCATTCACTCCTGATATAAAGAAGATTCAAGATGATATTGCAGGACCCTTAGGATTGTCATTGAAGGATTATGTTGAATCAGACCGGCCTAAAAAATTGTGGAGCAGATTAACCAATGGTGAGAAAATTCTTGTGATATTGGATGATGTGTGGAACCCTATCAATTTTGATAAAATAGGGATTCCATCTAGTGACAATCACAAAGGTTGCAGAGTTCTTGTAACCACACGTAATCTATCGGTATGTAATTCAATGAGATGTGAAAGGATAATTCAATTGGAGGTCTTATCCAAAGAAGACGCTCGAAATATGTTTAAAAGGTATGCTGGTATAGGTGATAATTCCTCTAAAAGTTTGATTGATAAGGGATGTAAAATTGCAGATGAATGCAAAGGATTACCAGTTGCAATTGCAGTTATTGGTAGCAGTTTAAAGGGAAAACAAGGTTTGGAAGAGTGGGATGTGGCCTTAAAATCCTTGCAGAAGCCTGTGTCTATGCATGGTGTCGATGAAAATTCGGTTGAAATTTATAAATGTTTGAAGTTTAGTTATGATTATATGAAGGATGAAAAAGTGAAGGGGTTGTTCCTCTTATGTTCTCTATTCCGAGAAGATGAAGAAATTTCTATTGAGATGTTAACTAGACTTGGCATAGGAGTAGGGCTTTTTGGGGAAGTCAATGACAAGTACGATGAAGCTCGAAGCCAAGTAGTTGTGGCAAAAAATAAACTCATTGATTCTTGTCTATTGTTGAAGGGTGATGAAGGAACCGTGAAAATGCATGACTTGGTTCGTGAAGTAGCCCTGTGGATAGCGAACAAAGAGATTCAAGCAGTGAATATGTCTAACCAAAGTCAGAAGTCATTGGTTGAAAATGAAAAGGAGAAGAATATTAAATATTTGTTATGTGAAGGCAAGGCTATAGATGTCTTTTCCTGGAAGTTTGATGTGTCTAAACTTGAGATTCTAATTCTTTACATTGACTATGATCAGTATACTATCGAAGTCCCAAATTCGTTCTTTGAAAATATGACAGGGCTTCAAGTTTTGCTTTTAGAAAATAATGTTCCTTGGAGAAGAGGGTGTCTATCATTACCACTGTCAATTCAGTCACTGATCAATATCAGATCTCTAATACTTTGTAATATTGAATTAGGTGACATCTCTATTCTAGGAAAACTGCAAAGCCTTGAGACTCTTGAGCTACTTTTTTGTAACTTCATTGAATTGCCACCAGAAACTGCTGATCTAAAGAAATTTAGGTTGTTGAAGTTGGAGTGTTGTGAAATAATGGTGAATGATCCATTTGAAGTGATTGACAAATGCACATCACTAGAAGAATTGTATATCATTTATTTCACATCTTTTATTAATCTTGACAAAGTAGCGATTCATAAAAGAAGAATCCCTCCTGCATTGCAAGGGTATCATTTATCTGAAAAGTTCCCTGATAATCCTATAATTGAATCAACGCGAAAATGTGTGGAATGTTCAGAGATTGAAGCCTTTTTCTCTGAAGAAACATTCAAGTATCTGGTGCAAACAGCAAATGTTCTTAAGCTAGATGTGGTTACAGGGGAATGGAGATGTCTCATACCTGAGATTGTTTCGATAGATAAAGGTATGAATGATCTACTTGAGCTTAATTTATATAAATTTTCACAACTAGAGTGCCTCATTGACACCAGGCATGTTAATTCTCATGAACAAAATGTCTTCACCAAGTTGGTTAGTATAACACTTCTTAACATGGGAAATTTGGAAGAACTATGCAAAGGTCTCCCTCCTTTTGACTTTCTCAAGAGTTTAGAGAGTATAGATATCAATGATTATCCACATCTGACAGGAATATTGTTTCAGAGCAAGCTAAACCTCTGCAATATCAAGACCATCGTACTCCAAAATTGCCCGATGTTGGTTTCCTTATTTCGACTATCAACTTCTCGAAGCCTTGTGCTATTAGAGAAATTGGAAATATATTGGTGTGAGCAATTGAAATGCATCATAATGGACAAATTTGGAGATGAGATAATTGACTGTGATAATGATAACAAGTGTGGCAAGACCATGTTTCCAAATTTAAGAACCCTTGAGATCAAAAGCTGTTCCCAATTAGAATTTGCTCTTCCATTCCTTTCTGCTCAAGATGTTCCGCTACTAGAACAAATGACAATAGAGAAATGTGATAAGCTAAAATACATATTTGGGCAGTATCGACATGAACATGAAGACAAGGATTTACATCAAAAGGTGCTTGGTTCACTAAAAGAAATGGAGCTCTCTGACTTGCCGAATTTCATTGATATTTTCCCTGCAGAATGTGATCATCCCATAATTATAAAGAGGTCTTCTCCCAAGGTTCAAATGCAATCAGACCCCATCACATGCAATATCTTTCCTTGGAAGTATACACACAAATTGAGGATGAGGAGTGCTAAAATCCCATTGGCTTCCAAGGATCAGTCCCAAGACAACCCAATCTCATTGACATCAACCTCATCCCCTCTTCACTTGTGGGAACGTGCTCAATGTCTTTCAAAACAATCACACATCCTATGCAACATTAGAAGGATTAAACTACACAATCTTTCCAAGATAAAATCAGTGTTTATCTTGTCCATTGTTCCAACAATGTTGTTGGAAACTTTGACAGTTGAGAATTGTGATGGACTGAAGCACATAATAGTAGACATTGGAGATTATCACTATGGCAACAATAGCGAGGGCATTGTCTTCCCAAATTTAAAAGAGCTCTGGGTGAAAGGTTGTGGACAGTTGGAATACATATTTGGACACTACACTACTCATGATCATCAATACCACAACGAGATTCACCTTCATTTTCCAGCATTAAAATGTCTCATGCTTCACAATTTGCAAAATTTAATTGCCATGTGTCCCAAAAACTATCGCACAACGTTGCCACCTTTAACAGAACTTAAACTCAATGAATGCTCCAAGTTTACCATTAAATCTATTGGTGATTTCATCTTCCAATTACGTGAATGCTCCCTCAACAGTGCAACCACCAAGGATTTGAGTGAGAATGTGAAACATTTTCTTACGTTGGAATATCTTGAGGTATATAACTCCAAAGCAGAAAATGTCTTTTGCCTCAATGAAATAGTTGAAGAAATGAATTTAGGGTTACAAATTATACAATTGGGTTATCTCCCTCAGATGACATATCTTTTTATGGGTACCAAAAAGTCTTTTTCCCTCCAAAATCTTACAAAGATAACAATTGTGCGATGTGAAAAATTGGAATTAATTTTTCCTGCTTCTATTTCAAGATATCTACCACTGTTGCGTGTGATAATAATAGTAGAATGCAAAGCATTGAAGTATATCATTGAAGAGGATGCAGAGAATGGGAAAATGTTAAATTCTTATTCTCCAAAGACAACCTTCCCAGAGCTAGAATTACTTAATGTCATAAATTGCAACAAGTTGAAATATGTATTTCCTATATCCACATGTAAAGAGCTTCCCAAGCTACGAAATCTAATGATACAAGAAGCACATGAGTTAGAGGAAGTATTCGGATGTGGAGGTGATCAGAAAATTGAGATTCCAAATCTAAAATTTGTAGCATTTGTCGAACTACCAAGTTTGTGCCAGGTTCAAGGGTTTCAATTCCAGTTTGTAACCGGACGTTTGGTGCATAATTGTCCAAAACTCTCTATGACTTCAAGTATCATCATTGGATTTTTCGATTATTATACTTATTTCCGAAACATAGAAAATGAATTGGGTTATGAATTGACGCCTGATATGAAGAGTCTATACATGCGAGCTATACAAAACTCTGAAGTTCAAGCAGCATCAGGACATGAGTTGAGTTCTTCACAGGAGTTGCAGAATGAACAATCAACAGATCAACAATGTTTGATGAACCAACAACATCCACTTGGAGAAACTGATGCTAATACTTCTCAAGAAAATAATTGCCTAAAAGAAACAGAGGACCAGAGTATTCAAAAGGGTTCTACATTGGAAAAAACTACAATAGCAACTTCGTCCACTGATTCAAAAACAAGGAAGGATACTGAGATTAGCGCTGAAGAAGGAACTACATCAGCTAATGTCAAGACTATAATATCACCAACTAACTTAGAATCAGGGAGTTCACCATCAAAACCATTGGTTACTTCTGAGCATAAAACATATTCACAGGAAGATGGTGGTGGCCAAATAACCATCCCTTCTTTTCCAACAGAGCCTCAATATGCCATCAAAGATGTTGATATTAGGGACTCTCTGGAAACTACTAAGGTTAATGATACAGTTTCTTTAAAAGGTGACACTTCCATGAAAGTAAGCTCAATCATTGAAGAACAATTTTCAATTGATGATGACACAAGAGTTTTAGTATCTAAACCCTCTCCTATTTCATCTCAACCTCCTTCAGTTCCATCCAAAGCTTTAGGGGACACTTCTAAGATCATGGAAGATTTAAGTATTGCTACTCTTATCACACGAGAGCTTGAGCAATTGGTTTTCAACAAGCATTTGAGTTATGAGAACTTGTCTTTGTTGACTGAATTCCTTATAAAGCATCCCTCTGTTCGTTTAACAGAGAATTCACTTAGTAATAGATACAAGGGTTATGCCTACAGTTGCCTAGCTGAGTTGCTTAAATTCCTCCAAAGCCATAGTGTGTTGGATGTGTTGGGGTCAAGCCATTCTGAATTTGTGGAGTTATTACAAGATGTGCGTAGATTTGCATTTGATAAGGATTGGTTGGACAGTGTTGAAAGGCGTGCCTTGTTTCCTCGTTTACAAGCCTCTCAAGATGCATTGCCAAAACTATTGGACTCAAAGCAGATTTTGAGTCAACAAGTGAAGGATCTTAAGCATCAATTAGCATCCTTTGAAGATGTTCTCGAGAGTATCATTCAGGAGGAGACACAAGTATTGGAAGCTAGAGATGCTTTGAGCGCCCCTCTTGGCTATTAA 5583 0.3688 MADIPTELAKTGLERLMNAAIEESRYMCCFTCIAEDFEKEKETLKAKKKTVEQRVQVAKNKGEDIRSDVTHWQDNADKLIQEDHDTKTKKTYFFGLCPDFKWRYSKGKDLANKTGEIKGLVLESGNFESSVGLPSHLPGVEYHSSQYYIPFKSRESKYKELLDALKDDNNYITGLQGMGGTGKTILAKQVGKELKVSKQFDQVIDTTVSFTPDIKKIQDDIAGPLGLSLKDYVESDRPKKLWSRLTNGEKILVILDDVWNPINFDKIGIPSSDNHKGCRVLVTTRNLSVCNSMRCERIIQLEVLSKEDARNMFKRYAGIGDNSSKSLIDKGCKIADECKGLPVAIAVIGSSLKGKQGLEEWDVALKSLQKPVSMHGVDENSVEIYKCLKFSYDYMKDEKVKGLFLLCSLFREDEEISIEMLTRLGIGVGLFGEVNDKYDEARSQVVVAKNKLIDSCLLLKGDEGTVKMHDLVREVALWIANKEIQAVNMSNQSQKSLVENEKEKNIKYLLCEGKAIDVFSWKFDVSKLEILILYIDYDQYTIEVPNSFFENMTGLQVLLLENNVPWRRGCLSLPLSIQSLINIRSLILCNIELGDISILGKLQSLETLELLFCNFIELPPETADLKKFRLLKLECCEIMVNDPFEVIDKCTSLEELYIIYFTSFINLDKVAIHKRRIPPALQGYHLSEKFPDNPIIESTRKCVECSEIEAFFSEETFKYLVQTANVLKLDVVTGEWRCLIPEIVSIDKGMNDLLELNLYKFSQLECLIDTRHVNSHEQNVFTKLVSITLLNMGNLEELCKGLPPFDFLKSLESIDINDYPHLTGILFQSKLNLCNIKTIVLQNCPMLVSLFRLSTSRSLVLLEKLEIYWCEQLKCIIMDKFGDEIIDCDNDNKCGKTMFPNLRTLEIKSCSQLEFALPFLSAQDVPLLEQMTIEKCDKLKYIFGQYRHEHEDKDLHQKVLGSLKEMELSDLPNFIDIFPAECDHPIIIKRSSPKVQMQSDPITCNIFPWKYTHKLRMRSAKIPLASKDQSQDNPISLTSTSSPLHLWERAQCLSKQSHILCNIRRIKLHNLSKIKSVFILSIVPTMLLETLTVENCDGLKHIIVDIGDYHYGNNSEGIVFPNLKELWVKGCGQLEYIFGHYTTHDHQYHNEIHLHFPALKCLMLHNLQNLIAMCPKNYRTTLPPLTELKLNECSKFTIKSIGDFIFQLRECSLNSATTKDLSENVKHFLTLEYLEVYNSKAENVFCLNEIVEEMNLGLQIIQLGYLPQMTYLFMGTKKSFSLQNLTKITIVRCEKLELIFPASISRYLPLLRVIIIVECKALKYIIEEDAENGKMLNSYSPKTTFPELELLNVINCNKLKYVFPISTCKELPKLRNLMIQEAHELEEVFGCGGDQKIEIPNLKFVAFVELPSLCQVQGFQFQFVTGRLVHNCPKLSMTSSIIIGFFDYYTYFRNIENELGYELTPDMKSLYMRAIQNSEVQAASGHELSSSQELQNEQSTDQQCLMNQQHPLGETDANTSQENNCLKETEDQSIQKGSTLEKTTIATSSTDSKTRKDTEISAEEGTTSANVKTIISPTNLESGSSPSKPLVTSEHKTYSQEDGGGQITIPSFPTEPQYAIKDVDIRDSLETTKVNDTVSLKGDTSMKVSSIIEEQFSIDDDTRVLVSKPSPISSQPPSVPSKALGDTSKIMEDLSIATLITRELEQLVFNKHLSYENLSLLTEFLIKHPSVRLTENSLSNRYKGYAYSCLAELLKFLQSHSVLDVLGSSHSEFVELLQDVRRFAFDKDWLDSVERRALFPRLQASQDALPKLLDSKQILSQQVKDLKHQLASFEDVLESIIQEETQVLEARDALSAPLGY. 1861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02528 1860 Gene3D - 140 300 IPR027417 -
Seca6g02528 1860 SUPERFAMILY L domain-like 1059 1417 - -
Seca6g02528 1860 Gene3D Ribonuclease Inhibitor 1118 1437 IPR032675 -
Seca6g02528 1860 SUPERFAMILY L domain-like 464 975 - -
Seca6g02528 1860 PRINTS Disease resistance protein signature 338 352 - -
Seca6g02528 1860 PRINTS Disease resistance protein signature 245 259 - -
Seca6g02528 1860 PRINTS Disease resistance protein signature 172 187 - -
Seca6g02528 1860 PRINTS Disease resistance protein signature 897 913 - -
Seca6g02528 1860 MobiDBLite consensus disorder prediction 1563 1612 - -
Seca6g02528 1860 MobiDBLite consensus disorder prediction 1512 1551 - -
Seca6g02528 1860 Coils Coil 1816 1843 - -
Seca6g02528 1860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 407 IPR027417 -
Seca6g02528 1860 Coils Coil 34 61 - -
Seca6g02528 1860 Gene3D - 304 390 IPR042197 -
Seca6g02528 1860 Gene3D Ribonuclease Inhibitor 768 1007 IPR032675 -
Seca6g02528 1860 Gene3D Ribonuclease Inhibitor 475 707 IPR032675 -
Seca6g02528 1860 FunFam Probable disease resistance protein At1g61300 146 297 - -
Seca6g02528 1860 Pfam NB-ARC domain 159 393 IPR002182 GO:0043531
Seca6g02528 1860 Gene3D - 391 474 IPR036388 -
Seca6g02528 1860 MobiDBLite consensus disorder prediction 1512 1612 - -
Seca6g02528 1860 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1116 1413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02528 Seca-Chr6 88545613 88555201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02528 173 636 WRKY Transcription Factor Family AT5G45050 23.836 1.80e-18 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02528 - - tpra:123882159 1780.38