Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02513 ATGGGTTACATCCCTAGTTTTTTCCAGTCACACCTTCACTTCTTCTGGACTTCTTTACTGGTTATGATTTCTGGCTTTACAATTATCAAAGCCCTAAGATTTCACTTAATTGAGAAGTTCAAGAAACCCAACCTTCCCCCAGGTCCAAAACCATGGCCTATAGTCGGCAATCTTCCTGAAATGCTTGCAAACAAGCCTGCTTTTCGGTGGATACACAAGCTCATGAATGATCTCAACACCGAAATTGCATGCATCCGTTTAGGAAATGTCCATGTTATCCCTGTGACTTGTCCCACAATTGCTCGTGAATTCTTGAGAAAACAAGACGCTATTTTTGCGTCAAGACCCATAAGCATGTCCACTAATGCTATTACTAGTGGTTATGTGACGACAGCGCTTGTGCCTTTTGGGGAACAATGGAAGAAAATGAAGAAAATTTTAGTCAATGATTTGTTCTCCCCTCTAAGGCATCAATGGCTTCAACATAAAAGGAATGAAGAAGCTGATAACCTTGTGTTTTATGTCTACAACAAATGCAAAATTGTGAATAACAATATTCATGGCCTTGTGAATGTGAGGCTTGCTGCGAAGCATTATTGTGGTAACGTGTTCAGGAAGCTTGTTTTTAATACAAGGTATTTTGGAAAGGGTAGGGTGGATGGAGGGCCTGGTGTTGAGGAAGTGGAACATGTGGATGCTGCTTTTACGTTGCTTATGCACATTTATGCATTTTGTGTTTCTGATTATATTTCATGTTTGAGAGGACTTGACTTGGATGGACATAAGAGTAAGGTGAATGATGCTATGAGGGTCATGAAGAAGTATCATGATTCCATCATTGAAGAGAGGATTCAACAATGGAATGATGGATTGAAGACCGTTGAAGAGGACTTGCTGGATGTTCTCATCTCACTGAAAGATGTCAATAATAAACCATTATTAACATTGAAGGAAATCAAGGCGCAAATTATAGAATTGATGATTGAGCTGGTGGACAATCCATCAAATGCTGTGGAATGGGCACTAGCAGAAATGATAAATAAGCCTGAGTTGCTTCAACGAGCTACTGAAGAATTGGACAACGTGGTTGGGAAAGAGAGGTTAGTCCAAGAATCAGATATCCCTAAGCTCAACTTTGTGAAGGCTTGTGTAAGAGAAGCTTTTCGCCTTCATCCCATTGTGGCTTTTAATGTTCCCCATGTCTCTATGACTGATACAATGGTTGGCAATTACTTGATCCCAAAAGGTAGTCATGTACTACTAAGCAGAAGTGGCCTTGGGAGAAACCCAAAAGTTTGGACTGAGCCCCACAAATTCAAACCAGAACGTCATCTCAAGAGTCATGGGTCTGATGTAGTTTTGACAGAGCCAGATTTGAGGTTCATATCCTTTAGCACAGGAAGACGTAGTTGTCCAGGTGTAATGCTTGGAACCACAATGACAGTGATGTTACTTGCTAGGTTGCTCCAAGGCTTTCATTGGAGTGTACCTCCCAACATATCAAACATCAATCTTGCTGAGTCTATTAGTGATATGTTCCTTGCTGAGCCACTTGTGGGAGTAGCAAAGCCAAGATTAGCAGCAGAACTATATATACCACATATGAATTAA 1611 0.4078 MGYIPSFFQSHLHFFWTSLLVMISGFTIIKALRFHLIEKFKKPNLPPGPKPWPIVGNLPEMLANKPAFRWIHKLMNDLNTEIACIRLGNVHVIPVTCPTIAREFLRKQDAIFASRPISMSTNAITSGYVTTALVPFGEQWKKMKKILVNDLFSPLRHQWLQHKRNEEADNLVFYVYNKCKIVNNNIHGLVNVRLAAKHYCGNVFRKLVFNTRYFGKGRVDGGPGVEEVEHVDAAFTLLMHIYAFCVSDYISCLRGLDLDGHKSKVNDAMRVMKKYHDSIIEERIQQWNDGLKTVEEDLLDVLISLKDVNNKPLLTLKEIKAQIIELMIELVDNPSNAVEWALAEMINKPELLQRATEELDNVVGKERLVQESDIPKLNFVKACVREAFRLHPIVAFNVPHVSMTDTMVGNYLIPKGSHVLLSRSGLGRNPKVWTEPHKFKPERHLKSHGSDVVLTEPDLRFISFSTGRRSCPGVMLGTTMTVMLLARLLQGFHWSVPPNISNINLAESISDMFLAEPLVGVAKPRLAAELYIPHMN. 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02513 536 PANTHER CYTOCHROME P450 98A9 22 531 - -
Seca6g02513 536 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 FunFam Cytochrome P450 9 38 529 - -
Seca6g02513 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Seca6g02513 536 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 CDD CYP79 80 526 - -
Seca6g02513 536 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02513 536 Gene3D Cytochrome P450 38 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02513 Seca-Chr6 88210514 88214064 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02513 41 531 Cytochrome P450 AT4G39950 58.130 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02513 - K12153 gmx:100809902 790.801