Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02508 ATGACAATTGCAACCGTGGATAATCCATCAAATGCAGTTGAAAGGGGACTTGCTGAAATGATAAATCAACCTGAGCTACTCCAAAAGGCCATTGAAGAATTGGACAATGTGGTTGGTAAAGAGAGACAAGTGCAAGAATCAGATTTTCCGAAGCTCAACTATGTGAAGGCATGTGCAAGAGAAGCTTTTCGCCTTCACCCCATTGTGGATTTTATCATTCCACATGTCTCAGTAGCTGACGCAGTTGTTGCTAATTACTTCATCCCAAAGGGTAGCCAAGTGTTGCTAAGGAGACAAGGAGTTGGCCAAAACCCAAGAGTTCGGAAAGAACCACTCAAGTTTAAACCTGAACGTCACCTTAAGAGTGATGGCTCTAATTTGGTCTTAACAGAGCCAAGTTTGAAATTAATAACATTTAGCACTGGGAGACGTGGTTGTCCAGGGCTTATGCTTGGTAGTGACATGACTATTATGTTATTCGCTAGGTTGCTGCATGGCTTCACTTGGAATGTGCCACCCAATCAATCTACCATTGACCTCTCTGAATCTGAAGGAGATACGACCAAAGCTAAGCCACTTGTGGCATTTGCAAAGCCAAGGTTACCAACAGAGGCTTATCGTATATATTAA 630 0.427 MTIATVDNPSNAVERGLAEMINQPELLQKAIEELDNVVGKERQVQESDFPKLNYVKACAREAFRLHPIVDFIIPHVSVADAVVANYFIPKGSQVLLRRQGVGQNPRVRKEPLKFKPERHLKSDGSNLVLTEPSLKLITFSTGRRGCPGLMLGSDMTIMLFARLLHGFTWNVPPNQSTIDLSESEGDTTKAKPLVAFAKPRLPTEAYRIY. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02508 209 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 207 - -
Seca6g02508 209 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 Gene3D Cytochrome P450 1 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Seca6g02508 209 Pfam Cytochrome P450 1 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS P450 superfamily signature 22 35 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02508 209 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02508 Seca-Chr6 88149591 88150220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02508 1 206 Cytochrome P450 AT5G05260 58.252 2.30e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02508 - K12153 adu:107486438 313.153